RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 FBXO9Q9UK97 447 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KIF13AQ9H1H9 1805 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF638Q14966 1978 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PIGBOS1A0A0B4J2F0 54 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DPPA5A6NC42 116 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 A8MT66 165 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ECI2O75521 394 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PRH1P02810 166 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 RPS21P63220 83 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KCNJ11Q14654 390 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF676Q8N7Q3 588 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SMPDL3AQ92484 453 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 KIAA1191Q96A73 305 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM125Q96AQ2 219 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OAZ3Q9UMX2 235 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 BAIAP2Q9UQB8 552 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ANKRD36CQ5JPF3 1778 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CACNA1SQ13698 1873 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ARL6IP5O75915 188 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DBIP07108 87 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ENDOUP21128 410 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 BTN3A2P78410 334 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 C4orf46Q504U0 113 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF776Q68DI1 518 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NANOGNBQ7Z5D8 188 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DCAF4L2Q8NA75 395 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PLA2G15Q8NCC3 412 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 SLC5A11Q8WWX8 675 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PMEPA1Q969W9 287 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 B3GNT4Q9C0J1 378 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF536O15090 1300 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 FAM149AA5PLN7 773 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 AGPSO00116 658 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CCL22O00626 93 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 MT-ND1P03886 318 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NELFEP18615 380 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 IL1R2P27930 398 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 PDHA2P29803 388 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DAG1Q14118 895 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 DSC3Q14574 896 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CHRNA6Q15825 494 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 RNF220Q5VTB9 566 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 RPL13AP3Q6NVV1 102 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF615Q8N8J6 731 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 FAM156AQ8NDB6 213 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CYB5D2Q8WUJ1 264 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZDHHC12Q96GR4 267 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 RDH12Q96NR8 316 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 GFM1Q96RP9 751 aaKnown RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OSBPL7Q9BZF2 842 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 C12orf4Q9NQ89 552 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 HOXB2P14652 356 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 MATN1P21941 496 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CTSOP43234 321 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OC90Q02509 493 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 BLMHQ13867 455 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OR8H1Q8NGG4 311 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TSPEARQ8WU66 669 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TFGQ92734 400 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 EZH1Q92800 747 aaPredicted RBP5.31□□□□□ -1.56
VPS13C-204ENST00000395898 OTUB2Q96DC9 234 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 CGREF1Q99674 301 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 EHD1Q9H4M9 534 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 ZDHHC2Q9UIJ5 367 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM5Q9Y2B1 443 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC42Q9Y546 428 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 HS3ST4Q9Y661 456 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 NUP205Q92621 2012 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 FER1L6Q2WGJ9 1857 aa5.31□□□□□ -1.56
VPS13C-204ENST00000395898 EI24O14681 340 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TBX18O95935 607 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SLC2A2P11168 524 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ACP5P13686 325 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GADD45AP24522 165 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SLITRK4Q8IW52 837 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 BPIFB1Q8TDL5 484 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 IRF7Q92985 503 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CITED4Q96RK1 184 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RABL2AQ9UBK7 228 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 DKK3Q9UBP4 350 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RABL2BQ9UNT1 228 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 MAU2Q9Y6X3 613 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ACOX3O15254 700 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ERI3O43414 337 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 F8A1P23610 371 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CCNHP51946 323 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GSTM4Q03013 218 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 EMX2Q04743 252 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PDSS1Q5T2R2 415 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 DCAF12L1Q5VU92 463 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 P4HA3Q7Z4N8 544 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 HMGB4Q8WW32 186 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ADAD1Q96M93 576 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 AIFM2Q9BRQ8 373 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ELAC1Q9H777 363 aaKnown RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 YIPF1Q9Y548 306 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 A0A075B6Q4 140 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 VEGFDO43915 354 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 F2P00734 622 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CYP17A1P05093 508 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms