RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 DUSP23Q9BVJ7 150 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CARS2Q9HA77 564 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SH3GLB1Q9Y371 365 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR10H2O60403 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SIX3O95343 332 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 EPORP19235 508 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 POLE2P56282 527 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RPS15AP62244 130 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ACSBG2Q5FVE4 666 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DNAJC14Q6Y2X3 702 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DET1Q7L5Y6 550 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 USP7Q93009 1102 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ANKHQ9HCJ1 492 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PAPOLBQ9NRJ5 636 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 P2RX2Q9UBL9 471 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ADAM29Q9UKF5 820 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PCTPQ9UKL6 214 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C1orf226A1L170 272 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FAM86C2PA6NEL3 165 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FAM47E-STBD1D6RA91 191 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MFN2O95140 757 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MED26O95402 600 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CHRNGP07510 517 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 GGT5P36269 586 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C21orf59P57076 290 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DENND5AQ6IQ26 1287 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 REEP3Q6NUK4 255 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TAF8Q7Z7C8 310 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HPS6Q86YV9 775 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 GALNT4Q8N4A0 578 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 EBF4Q9BQW3 602 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TPT1P8Q9HAU6 139 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TAS2R9Q9NYW1 312 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM9Q9P0T7 183 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.28□□□□□ -1.889e-15■■□□□ 12.4
VPS13C-203ENST00000395896 KLHL20Q9Y2M5 609 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PCDHB3Q9Y5E6 796 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 A0A096LPI6 279 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C6P13671 934 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AOAHP28039 575 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AVPR1BP47901 424 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CYTH1Q15438 398 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FAM189A2Q15884 450 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SPANXN2Q5MJ10 180 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NOXRED1Q6NXP6 359 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM154Q6P9G4 183 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CYP2R1Q6VVX0 501 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF786Q8N393 782 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SIDT2Q8NBJ9 832 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR8J2Q8NGG1 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR56A1Q8NGH5 318 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FERD3LQ96RJ6 166 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CD180Q99467 661 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SH3GL3Q99963 347 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ATG10Q9H0Y0 220 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 POT1Q9NUX5 634 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LHX3Q9UBR4 397 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LDOC1O95751 146 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PAK4O96013 591 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 IGHA2P01877 340 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SLC6A4P31645 630 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FUT11Q495W5 492 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF605Q86T29 641 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 THOC6Q86W42 341 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RNF168Q8IYW5 571 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TTC29Q8NA56 475 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OLIG1Q8TAK6 271 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF578Q96N58 590 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C2orf74A8MZ97 194 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SRPX2O60687 465 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FHP07954 510 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CDH1P12830 882 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CD70P32970 193 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RIPPLY1Q0D2K3 151 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ARHGAP36Q6ZRI8 547 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TSPAN14Q8NG11 270 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR7G3Q8NG95 312 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR5K2Q8NHB8 316 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SP7Q8TDD2 431 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AUTS2Q8WXX7 1259 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DACH2Q96NX9 599 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR2AG1Q9H205 316 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PRDM9Q9NQV7 894 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZCCHC3Q9NUD5 404 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A9O60656 530 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MRPS14O60783 128 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A6P19224 532 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A1P22309 533 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ETV3P41162 512 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ARSDP51689 593 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ERVFC1P60507 584 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PLIN5Q00G26 463 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DUSP6Q16828 381 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 Q6ZNB5 142 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OFCC1Q8IZS5 231 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF420Q8TAQ5 688 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 METTL21AQ8WXB1 218 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SLC7A6OSQ96CW6 309 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms