RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NR6A1Q15406 480 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PLA2G2CQ5R387 149 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 CARFQ8N187 725 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 NAT6Q93015 286 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 ZDHHC12Q96GR4 267 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 OR2A14Q96R47 310 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 OR52B2Q96RD2 323 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 SARGQ9BW04 601 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 RHBGQ9H310 441 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 SAR1AQ9NR31 198 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 PADI4Q9UM07 663 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 KLK4Q9Y5K2 254 aa13.16□□□□□ -0.3
VAPB-202ENST00000395802 ATP6AP2A0A1C7CYW4 349 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 TRBC2A0A5B9 178 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 CAPN14A8MX76 684 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 NPIPB8E9PQR5 432 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 TNFSF14O43557 240 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 DUX1O43812 170 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 PRAMEF4O60810 478 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 ATP6AP2O75787 350 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 GIMD1P0DJR0 217 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 IDO1P14902 403 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 MAPK1P28482 360 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 AHRP35869 848 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 DUSP3P51452 185 aaPredicted RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 ERVK-8P63133 956 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 REEP5Q00765 189 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 GSTA3Q16772 222 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 SGO1Q5FBB7 561 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 TCHHL1Q5QJ38 904 aaPredicted RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 PRAMEF9Q5VWM5 478 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 KANSL1Q7Z3B3 1105 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 GATAD2AQ86YP4 633 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 FNDC5Q8NAU1 212 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 HUS1BQ8NHY5 278 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 JPH3Q8WXH2 748 aaPredicted RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 CD180Q99467 661 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 CAAP1Q9H8G2 361 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 C1orf109Q9NX04 203 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 AHSPQ9NZD4 102 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 ARMCX1Q9P291 453 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 VPS29Q9UBQ0 182 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 EIF3LQ9Y262 564 aaKnown RBP13.15□□□□□ -0.3
VAPB-202ENST00000395802 CABIN1Q9Y6J0 2220 aa13.15□□□□□ -0.3
VAPB-202ENST00000395802 A0A0J9YY10 115 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 MYO1DO94832 1006 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 CBX6O95503 412 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 ACPPP15309 386 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 RPS15AP62244 130 aaKnown RBP13.14□□□□□ -0.31
VAPB-202ENST00000395802 CSNK1G2P78368 415 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 NR1D2Q14995 579 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 RPS6KA2Q15349 733 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 AP5B1Q2VPB7 878 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 Q6ZSR9 355 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 PLXDC1Q8IUK5 500 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 SFTPA2Q8IWL1 248 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 MINDY1Q8N5J2 469 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 TRPV3Q8NET8 790 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 MTFMTQ96DP5 389 aaKnown RBP13.14□□□□□ -0.31
VAPB-202ENST00000395802 THAP11Q96EK4 314 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 CMTM7Q96FZ5 175 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 C3orf30Q96M34 536 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 MTERF1Q99551 399 aaKnown RBP13.14□□□□□ -0.31
VAPB-202ENST00000395802 SERPINI1Q99574 410 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 CCDC106Q9BWC9 280 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 IL21RQ9HBE5 538 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 LRTM1Q9HBL6 345 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 C1GALT1Q9NS00 363 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 TXLNGQ9NUQ3 528 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 CUEDC1Q9NWM3 386 aaPredicted RBP13.14□□□□□ -0.31
VAPB-202ENST00000395802 NOP53Q9NZM5 478 aaKnown RBP13.14□□□□□ -0.31
VAPB-202ENST00000395802 EPHA6Q9UF33 1036 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 POMT2Q9UKY4 750 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 SH2B3Q9UQQ2 575 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 RNF215Q9Y6U7 377 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 ZNF318Q5VUA4 2279 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 TMEM131Q92545 1883 aa13.14□□□□□ -0.31
VAPB-202ENST00000395802 LSM1O15116 133 aaKnown RBP13.13□□□□□ -0.31
VAPB-202ENST00000395802 OR1F1O43749 312 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
VAPB-202ENST00000395802 PEX11AO75192 247 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 SEC22BO75396 215 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 DNAJC8O75937 253 aaPredicted RBP13.13□□□□□ -0.31
VAPB-202ENST00000395802 ZNF806P0C7X5 589 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 PRR35P0CG20 571 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 TYRP1P17643 537 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 ALDH4A1P30038 563 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 GRIA3P42263 894 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 HTR6P50406 440 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 ATP4BP51164 291 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 NEK2P51955 445 aa13.13□□□□□ -0.31
VAPB-202ENST00000395802 EMX2Q04743 252 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms