RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 I3L1I5 382 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 SMAPO00193 183 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 ZBTB14O43829 449 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 KIF5CO60282 957 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 NSA2O95478 260 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 C8orf89P0DMQ9 161 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 AVPR1BP47901 424 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 KCNJ1P48048 391 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 EEF1A2Q05639 463 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 ABHD17BQ5VST6 288 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 MTFR2Q6P444 385 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 CYHR1Q6ZMK1 362 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 CAND1Q86VP6 1230 aaKnown RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 FJX1Q86VR8 437 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 SIRT6Q8N6T7 355 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 MCUQ8NE86 351 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 SUN3Q8TAQ9 357 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 MARVELD3Q96A59 401 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 FAM136AQ96C01 138 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 THAP11Q96EK4 314 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 MAGEB10Q96LZ2 347 aaPredicted RBP16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 YIPF2Q9BWQ6 316 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 TMEM184CQ9NVA4 438 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 PLA2G3Q9NZ20 509 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 SAMD15Q9P1V8 674 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 COPG2Q9UBF2 871 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 MKL2Q9ULH7 1088 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 DHRS7Q9Y394 339 aa16.57■□□□□ 0.24
SNRPA1-202ENST00000394082 SDR42E2A6NKP2 422 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 PRAMEF2O60811 474 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 RASAL1O95294 804 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 WDPCPO95876 746 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 ITGAMP11215 1152 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 RPS15AP62244 130 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 DHX34Q14147 1143 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 LONRF1Q17RB8 773 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 SP5Q6BEB4 398 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 PLAG1Q6DJT9 500 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF470Q6ECI4 717 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 LRRC8EQ6NSJ5 796 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 HIBCHQ6NVY1 386 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 H3F3CQ6NXT2 135 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 GAS2L3Q86XJ1 694 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 PRELID2Q8N945 189 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 TRIM58Q8NG06 486 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 METTL21AQ8WXB1 218 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 SLC30A3Q99726 388 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 PCBD2Q9H0N5 130 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 CCDC68Q9H2F9 335 aa16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 XAB2Q9HCS7 855 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 C19orf25Q9UFG5 118 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 TSR3Q9UJK0 312 aaKnown RBP16.56■□□□□ 0.24
SNRPA1-202ENST00000394082 ZCWPW2A0A1B0GU75 182 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 CTAGE9A4FU28 777 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 CDK2AP1O14519 115 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 HAT1O14929 419 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 P2RX6O15547 441 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 AVILO75366 819 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 IMPA1P29218 277 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 EFNA3P52797 238 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 TSTA3Q13630 321 aaPredicted RBP16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 THOC5Q13769 683 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 PTK6Q13882 451 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 CASC4Q6P4E1 433 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 TMEM207Q6UWW9 146 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 GFRALQ6UXV0 394 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 PPFIBP2Q8ND30 876 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 CALML6Q8TD86 181 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 MCOLN3Q8TDD5 553 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 CYTH2Q99418 400 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 VN1R1Q9GZP7 353 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 STMN3Q9NZ72 180 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 OTOGQ6ZRI0 2925 aa16.55■□□□□ 0.24
SNRPA1-202ENST00000394082 H7BY64 318 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 FFAR3O14843 346 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 GPR42O15529 346 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 UQCRHP07919 91 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 CELA2AP08217 269 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 IL10P22301 178 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 MAGEA3P43357 314 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 AGTR2P50052 363 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 KCNK10P57789 538 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 GPS1Q13098 491 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 SYT16Q17RD7 645 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 THEMIS2Q5TEJ8 643 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 FAAH2Q6GMR7 532 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 ZNF549Q6P9A3 640 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 RPTNQ6XPR3 784 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 VN1R4Q7Z5H5 301 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 CPEB2Q7Z5Q1 589 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 ADCK2Q7Z695 626 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 CD200R1Q8TD46 325 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 ITLN2Q8WWU7 325 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 TM4SF19Q96DZ7 209 aa16.54■□□□□ 0.24
SNRPA1-202ENST00000394082 PRAP1Q96NZ9 151 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms