RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PRMT9Q6P2P2 845 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SLC2A7Q6PXP3 512 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SYT12Q8IV01 421 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 C1orf52Q8N6N3 182 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 GLB1L3Q8NCI6 653 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 HIPK4Q8NE63 616 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FAM174AQ8TBP5 190 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 LRRC58Q96CX6 371 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 HOPXQ9BPY8 73 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 ORAI3Q9BRQ5 295 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 OR51B5Q9H339 312 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SRMSQ9H3Y6 488 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 MRPS30Q9NP92 439 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 SPAG4Q9NPE6 437 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SLC52A3Q9NQ40 469 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 DMRT3Q9NQL9 472 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 TAAR2Q9P1P5 351 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 KLF15Q9UIH9 416 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PCOLCE2Q9UKZ9 415 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 POMPQ9Y244 141 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 GNG14A0A1W2PPG7 69 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ASPDHA6ND91 283 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 NPIPB8E9PQR5 432 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FOXE1O00358 373 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 OR1F1O43749 312 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 VIPP01282 170 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 LMNAP02545 664 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 SERPIND1P05546 499 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 JUNDP17535 347 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SDC1P18827 310 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SHMT2P34897 504 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 BLKP51451 505 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SLC7A2P52569 658 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 CLNS1AP54105 237 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 CLDN8P56748 225 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 CYP4F2P78329 520 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PRDX1Q06830 199 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 CEACAM7Q14002 265 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PGS1Q32NB8 556 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SPIN4Q56A73 249 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 PARGQ86W56 976 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 AMIGO1Q86WK6 493 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 FAM129CQ86XR2 697 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 DCP2Q8IU60 420 aaKnown RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 FAM156AQ8NDB6 213 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 CADM4Q8NFZ8 388 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 DNAJB14Q8TBM8 379 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 GPBAR1Q8TDU6 330 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 HSPA12BQ96MM6 686 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 SPHK1Q9NYA1 384 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ARHGEF17Q96PE2 2063 aaPredicted RBP8.31□□□□□ -1.08
TDP1-203ENST00000393454 KNL1Q8NG31 2342 aa8.31□□□□□ -1.08
TDP1-203ENST00000393454 ABCA7Q8IZY2 2146 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 TRIM38O00635 465 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 KRT36O76013 467 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PSMG1O95456 288 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 WNT1P04628 370 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 IL6P05231 212 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 ANXA4P09525 319 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 XRCC1P18887 633 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 PTX3P26022 381 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 S100A3P33764 101 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PIK3CBP42338 1070 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 ATXN3P54252 364 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 ACTR3P61158 418 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 MAPKAPK3Q16644 382 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SPANXN4Q5MJ08 99 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SAMD4BQ5PRF9 694 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 C6orf10Q5SRN2 563 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 IYDQ6PHW0 289 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SLC36A4Q6YBV0 504 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 ARMCX6Q7L4S7 300 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 DHDDSQ86SQ9 333 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PLD3Q8IV08 490 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.3□□□□□ -1.08
TDP1-203ENST00000393454 TMEFF1Q8IYR6 380 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 ABHD11Q8NFV4 315 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 OR2A1Q8NGT9 310 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CHTF18Q8WVB6 975 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SLC13A3Q8WWT9 602 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PATE1Q8WXA2 126 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 EGLN2Q96KS0 407 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 OR52E6Q96RD3 313 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PCED1AQ9H1Q7 454 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CLMPQ9H6B4 373 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 DCLRE1BQ9H816 532 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SLAMF8Q9P0V8 285 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 APOBEC3BQ9UH17 382 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 L3MBTL1Q9Y468 752 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CEP192Q8TEP8 1941 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 GOLGA4Q13439 2230 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 A6NCN8 305 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 TLR4O00206 839 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PCDH7O60245 1069 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CCNDBP1O95273 360 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms