RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 APOBEC3BQ9UH17 382 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF225Q9UK10 706 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF221Q9UK13 617 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PADI3Q9ULW8 664 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SPATA2Q9UM82 520 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 APOBEC2Q9Y235 224 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ITM2BQ9Y287 266 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PPP2R2CQ9Y2T4 447 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NFE2L3Q9Y4A8 694 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CLDN16Q9Y5I7 305 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 STON1Q9Y6Q2 735 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 S4R3C0 116 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 A3GALT2U3KPV4 340 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 COL27A1Q8IZC6 1860 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MROH7-TTC4A0A0A0MT08 1334 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 UTYO14607 1347 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IGSF1Q8N6C5 1336 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TDRD15B5MCY1 1934 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GREB1LQ9C091 1923 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF462Q96JM2 2506 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MUC17Q685J3 4493 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FLGP20930 4061 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ARHGEF40Q8TER5 1519 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CARMIL3Q8ND23 1372 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KIAA1210Q9ULL0 1709 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MAP1AP78559 2803 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 YEATS2Q9ULM3 1422 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGLV8-61A0A075B6I0 122 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A087WZY1 265 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV2D-26A0A0A0MRZ7 120 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV3-64DA0A0J9YX35 117 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 C17orf113A0A1B0GUU1 675 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A1W2PPL8 197 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 A0A1W2PRB8 838 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM234BA2RU67 622 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LRRD1A4D1F6 860 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM202A6NGA9 273 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NPIPB13A6NJU9 1138 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TRIM75PA6NK02 468 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HSPB2A8KAH6 182 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXI3A8MTJ6 420 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF705GA8MUZ8 300 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 B4DLN1 442 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ALG1L2C9J202 215 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX22C9J3V5 150 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KLRF2D3W0D1 207 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM90A26D6RGX4 464 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ANHXE9PGG2 379 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NPIPB9F8W1W9 429 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 K7EM74 188 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 M0QYT0 321 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 E2F3O00716 465 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ANKRD28O15084 1053 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 INPP4BO15327 924 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TEX28O15482 410 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IRAK2O43187 625 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 LRRTM2O43300 516 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF749O43361 778 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 EPB41L2O43491 1005 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CCDC22O60826 627 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 COQ9O75208 318 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 GLRA3O75311 464 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 KATNA1O75449 491 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CLN5O75503 358 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RFPL3O75679 317 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CDK2AP2O75956 126 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DUSP14O95147 198 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RTN3O95197 1032 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 ASMTLO95671 621 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TRUB2O95900 331 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SERPINC1P01008 464 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 VIPP01282 170 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IGKV2D-40P01614 121 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IL4P05112 153 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CENPBP07199 599 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 H1F0P07305 194 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HCKP08631 526 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NUDT17P0C025 328 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC35E2P0CK97 266 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 P0DMU3 169 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM231AP0DMU4 169 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM231CP0DMU5 169 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PPIAL4GP0DN37 164 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 DLATP10515 647 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CYP4B1P13584 511 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 MYOGP15173 224 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 IL9P15248 144 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 NPR1P16066 1061 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 BPIP17213 487 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 HOXB8P17481 243 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 PTPN2P17706 415 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RPL35AP18077 110 aaKnown RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 RCC1P18754 421 aaPredicted RBP-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 TSPAN8P19075 237 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 EDN2P20800 178 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 CHMP24386 653 aa-0.43□□□□□ -2.48
TRAJ28-201ENST00000390509 AKAP5P24588 427 aa-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms