RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 GSAPA4D1B5 854 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 I3L521 148 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PCDH7O60245 1069 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 C1QAP02745 245 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 FAM163BP0C2L3 166 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 CLCN4P51793 760 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 XKP51811 444 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 ATOH8Q96SQ7 321 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 INPP5KQ9BT40 448 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 OR51E2Q9H255 320 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PTTG1O95997 202 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 GSTM4Q03013 218 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 CSTF1Q05048 431 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 CAPN13Q6MZZ7 669 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 KRT78Q8N1N4 520 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 RHOXF1Q8NHV9 184 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 NUDT8Q8WV74 236 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 MROQ9BYG7 248 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SIAEQ9HAT2 523 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 SPG21Q9NZD8 308 aa12.76□□□□□ -0.37
TRAPPC9-201ENST00000389328 A6NL46 340 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 TLX2O43763 284 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 CAPN15O75808 1086 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SEC14L2O76054 403 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PDYNP01213 254 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PFKLP17858 780 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 RCVRNP35243 200 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PIGAP37287 484 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 HNRNPA0Q13151 305 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SUZ12Q15022 739 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 MED27Q6P2C8 311 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 BHLHB9Q6PI77 547 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ELMOD2Q8IZ81 293 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZFP3Q96NJ6 502 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SMIM14Q96QK8 99 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 EQTNQ9NQ60 294 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ASF1AQ9Y294 204 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 M0R129 80 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 WNT9AO14904 365 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 LDB2O43679 373 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 TGFB1P01137 390 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SBK3P0C264 359 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PAX3P23760 479 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 NTSP30990 170 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZBTB6Q15916 424 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 LIPKQ5VXJ0 399 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZSWIM9Q86XI8 627 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 UBE2E3Q969T4 207 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 WACQ9BTA9 647 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SLC29A3Q9BZD2 475 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZCCHC2Q9C0B9 1178 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ENTPD4Q9Y227 616 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZSCAN5BA6NJL1 495 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 GJB3O75712 270 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 CDK6Q00534 326 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 IDNKQ5T6J7 187 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 NOXRED1Q6NXP6 359 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 SHQ1Q6PI26 577 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZNF730Q6ZMV8 503 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PAQR9Q6ZVX9 377 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 BEND5Q7L4P6 421 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 MMAAQ8IVH4 418 aaKnown RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 TCEANCQ8N8B7 351 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 MUL1Q969V5 352 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 RAD18Q9NS91 495 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 ARAP2Q8WZ64 1704 aa12.75□□□□□ -0.37
TRAPPC9-201ENST00000389328 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 AGAP5A6NIR3 686 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 H3BM21 787 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPR32O75388 356 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SNAI1O95863 264 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 RPS17P08708 135 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 GKP32189 559 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 AP1S1P61966 158 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SNRPD2P62316 118 aaKnown RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 ZXDBP98169 803 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 CREMQ03060 361 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 BTBD16Q32M84 506 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 ATP13A5Q4VNC0 1218 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SPATC1Q76KD6 591 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 B3GNT8Q7Z7M8 397 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 PIANPQ8IYJ0 282 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 UFD1Q92890 307 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SPATA5L1Q9BVQ7 753 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 PRDM8Q9NQV8 689 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 STARD7Q9NQZ5 370 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 SCML2Q9UQR0 700 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 COL2A1P02458 1487 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 GPR39O43194 453 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 FYNP06241 537 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 C8GP07360 202 aa12.74□□□□□ -0.37
TRAPPC9-201ENST00000389328 DCDC1P59894 354 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms