RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 GPR21Q99679 349 aa16■□□□□ 0.15
SMN2-201ENST00000380741 CCDC68Q9H2F9 335 aa16■□□□□ 0.15
SMN2-201ENST00000380741 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
SMN2-201ENST00000380741 OLAHQ9NV23 265 aa16■□□□□ 0.15
SMN2-201ENST00000380741 RIC8BQ9NVN3 520 aa16■□□□□ 0.15
SMN2-201ENST00000380741 MRPS2Q9Y399 296 aaKnown RBP16■□□□□ 0.15
SMN2-201ENST00000380741 SCN2AQ99250 2005 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 LOC102723996A0A087X1L8 192 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 MAGEB16A2A368 324 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 DYTNA2CJ06 578 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 H7BY64 318 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 TXNDC9O14530 226 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 ZBTB14O43829 449 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 STATHP02808 62 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 ENO3P13929 434 aaPredicted RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 IMPA1P29218 277 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 SKIV2L2P42285 1042 aaKnown RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 TNFSF10P50591 281 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 MAT1AQ00266 395 aaKnown RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 FAM53BQ14153 422 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 PCOLCEQ15113 449 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 THEMIS2Q5TEJ8 643 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 CYHR1Q6ZMK1 362 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 PIWIL4Q7Z3Z4 852 aaKnown RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 CPNE9Q8IYJ1 553 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 AGGF1Q8N302 714 aaeCLIP15.99■□□□□ 0.15
SMN2-201ENST00000380741 CD200R1Q8TD46 325 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 MAGOHBQ96A72 148 aaKnown RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 MAGEB10Q96LZ2 347 aaPredicted RBP15.99■□□□□ 0.15
SMN2-201ENST00000380741 PRAP1Q96NZ9 151 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 TAAR6Q96RI8 345 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 DHRS7Q9Y394 339 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 SCN3AQ9NY46 2000 aa15.99■□□□□ 0.15
SMN2-201ENST00000380741 TRAV17A0A0B4J275 112 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 PCDH17O14917 1159 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 BMP10O95393 424 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 F10P00742 488 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 UQCRHP07919 91 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 MAGEA3P43357 314 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 PER3P56645 1201 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 MPP1Q00013 466 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 ZNF324BQ6AW86 544 aaPredicted RBP15.98■□□□□ 0.15
SMN2-201ENST00000380741 TMEM205Q6UW68 189 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 RIPOR1Q6ZS17 1223 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
SMN2-201ENST00000380741 LRRC8AQ8IWT6 810 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 SHISA5Q8N114 240 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 HAS2Q92819 552 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 MS4A14Q96JA4 679 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 EBNA1BP2Q99848 306 aaKnown RBP15.98■□□□□ 0.15
SMN2-201ENST00000380741 ZNF700Q9H0M5 742 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 C20orf96Q9NUD7 363 aaPredicted RBP15.98■□□□□ 0.15
SMN2-201ENST00000380741 MKL2Q9ULH7 1088 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 NEU2Q9Y3R4 380 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 COMMD10Q9Y6G5 202 aa15.98■□□□□ 0.15
SMN2-201ENST00000380741 JRKO75564 520 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 WFS1O76024 890 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 HAUS5O94927 633 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 C8orf89P0DMQ9 161 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 ITGAMP11215 1152 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 AVPR1BP47901 424 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 TDGF1P3P51864 188 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 TBPL1P62380 186 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 CCZ1BP86790 482 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 CCZ1P86791 482 aaPredicted RBP15.97■□□□□ 0.15
SMN2-201ENST00000380741 NDUFA9Q16795 377 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 LONRF1Q17RB8 773 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 CCDC137Q6PK04 289 aaKnown RBP15.97■□□□□ 0.15
SMN2-201ENST00000380741 PRSS41Q7RTY9 318 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 VN1R4Q7Z5H5 301 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 RASGEF1CQ8N431 466 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 OR9A4Q8NGU2 314 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 SIGLEC10Q96LC7 697 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 CCDC177Q9NQR7 707 aaPredicted RBP15.97■□□□□ 0.15
SMN2-201ENST00000380741 FBXO5Q9UKT4 447 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 MAD1L1Q9Y6D9 718 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 MYO7BQ6PIF6 2116 aa15.97■□□□□ 0.15
SMN2-201ENST00000380741 ZG16O60844 167 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 WDPCPO95876 746 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 STSP08842 583 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 COILP38432 576 aaPredicted RBP15.96■□□□□ 0.15
SMN2-201ENST00000380741 KCNK10P57789 538 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 ZRSR2Q15696 482 aaKnown RBP15.96■□□□□ 0.15
SMN2-201ENST00000380741 INAQ16352 499 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 CYP1B1Q16678 543 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 HSP90AA5PQ58FG0 334 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 HIBCHQ6NVY1 386 aaPredicted RBP15.96■□□□□ 0.15
SMN2-201ENST00000380741 FJX1Q86VR8 437 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 LMNTD2Q8IXW0 634 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 NAT8LQ8N9F0 302 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 CALML6Q8TD86 181 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 NR4A3Q92570 626 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 IMMP1LQ96LU5 166 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 MACROD1Q9BQ69 325 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 AARSD1Q9BTE6 412 aaKnown RBP15.96■□□□□ 0.15
SMN2-201ENST00000380741 TUBB6Q9BUF5 446 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 VN1R1Q9GZP7 353 aa15.96■□□□□ 0.15
SMN2-201ENST00000380741 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMN2-201ENST00000380741 TMEM184CQ9NVA4 438 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms