RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CYP4F3Q08477 520 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 EIF3IQ13347 325 aaKnown RBP12.13□□□□□ -0.47
SMN1-202ENST00000380707 TUBB3Q13509 450 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 RNF44Q7L0R7 432 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 MCATQ8IVS2 390 aaKnown RBP12.13□□□□□ -0.47
SMN1-202ENST00000380707 OR4N4Q8N0Y3 316 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 MDM1Q8TC05 714 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 MGARPQ8TDB4 240 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 TRPC4APQ8TEL6 797 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 PPP4R1Q8TF05 950 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 PMEPA1Q969W9 287 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 ZNF501Q96CX3 271 aaPredicted RBP12.13□□□□□ -0.47
SMN1-202ENST00000380707 WDR34Q96EX3 536 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 PRR11Q96HE9 360 aaPredicted RBP12.13□□□□□ -0.47
SMN1-202ENST00000380707 CDK15Q96Q40 435 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 CTRCQ99895 268 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 GATA5Q9BWX5 397 aaPredicted RBP12.13□□□□□ -0.47
SMN1-202ENST00000380707 EHD1Q9H4M9 534 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 GSTO2Q9H4Y5 243 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 FGF21Q9NSA1 209 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 PISDQ9UG56 409 aa12.13□□□□□ -0.47
SMN1-202ENST00000380707 B4E171 279 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 TMEM150CB9EJG8 249 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 BIRC5O15392 142 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 JMJD7P0C870 316 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 BCL6P41182 706 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 TSPAN7P41732 249 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 CCR10P46092 362 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 CCNG1P51959 295 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 ACY1Q03154 408 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 TRAF3Q13114 568 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 E2F2Q14209 437 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 SLBPQ14493 270 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMN1-202ENST00000380707 TBCCQ15814 346 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 RBBP7Q16576 425 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 ZC3H12BQ5HYM0 836 aaKnown RBP12.12□□□□□ -0.47
SMN1-202ENST00000380707 ZCCHC23Q6ZST2 131 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 OR1L3Q8NH93 324 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 ATP6V1E2Q96A05 226 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
SMN1-202ENST00000380707 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 PAIP2Q9BPZ3 127 aaKnown RBP12.12□□□□□ -0.47
SMN1-202ENST00000380707 ZFYVE21Q9BQ24 234 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 AIF1LQ9BQI0 150 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 NTMT1Q9BV86 223 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 SARGQ9BW04 601 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 POLR1BQ9H9Y6 1135 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 FBXO8Q9NRD0 319 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 SLC39A1Q9NY26 324 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 NKIRAS1Q9NYS0 192 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 ZNF225Q9UK10 706 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 PLCL2Q9UPR0 1127 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
SMN1-202ENST00000380707 KCNE1BA0A087WTH5 132 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 TRBC2A0A5B9 178 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 H0YGG7 62 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 H3BMH7 237 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 UBFD1O14562 309 aaKnown RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 POLR1CO15160 346 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 OR1F1O43749 312 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 H2AFYO75367 372 aaKnown RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 ADRB1P08588 477 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 GRK3P35626 688 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MAPK10P53779 464 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 VSX2P58304 361 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 ARF3P61204 181 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 RPS15AP62244 130 aaKnown RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 GABREP78334 506 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 REEP5Q00765 189 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 LCP2Q13094 533 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 IL11RAQ14626 422 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 HHATQ5VTY9 493 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 FAM219BQ5XKK7 198 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 FRMD7Q6ZUT3 714 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ANKRD53Q8N9V6 530 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 L3MBTL4Q8NA19 623 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 EFCAB11Q9BUY7 163 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 SPRTNQ9H040 489 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 STARD5Q9NSY2 213 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ZNF490Q9ULM2 529 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 PCDHGA8Q9Y5G5 932 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 PCDHGA4Q9Y5G9 962 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 H3BQF6 201 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 TNFSF15O95150 251 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 CLDN9O95484 217 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 OTCP00480 354 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 STATHP02808 62 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 EIF2S1P05198 315 aaKnown RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 FGF5P12034 268 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 CXCR2P25025 360 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ARL1P40616 181 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 SCTRP47872 440 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ERVPABLB-1P60509 514 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 PPP2R2AP63151 447 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ASPHQ12797 758 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms