RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 MAPKAPK3Q16644 382 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 KDM4DQ6B0I6 523 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 NPNTQ6UXI9 565 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 UNC5BQ8IZJ1 945 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ANKRD52Q8NB46 1076 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 IPMKQ8NFU5 416 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SRRQ9GZT4 340 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 DNTTIP1Q9H147 329 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ZNF112Q9UJU3 913 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 AP1M2Q9Y6Q5 423 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SULT1C2O00338 296 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SCAMP3O14828 347 aaKnown RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 TCAPO15273 167 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SELENOFO60613 162 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 IL33O95760 270 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SPP1P10451 314 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ITGAMP11215 1152 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 HOXB8P17481 243 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SPAM1P38567 509 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 CAP2P40123 477 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ATP12AP54707 1039 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 PRKG2Q13237 762 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 CHRNA6Q15825 494 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 JADE1Q6IE81 842 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 KCTD6Q8NC69 237 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 OR9I1Q8NGQ6 314 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ZNF606Q8WXB4 792 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 RDH12Q96NR8 316 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 MCCC1Q96RQ3 725 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 UGT2B28Q9BY64 529 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 ZNF436Q9C0F3 470 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 OR51E2Q9H255 320 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 RIMS4Q9H426 269 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 DUSP21Q9H596 190 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 MBD1Q9UIS9 605 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 STAP1Q9ULZ2 295 aa9.1□□□□□ -0.95
PTPRA-204ENST00000380393 MTF2Q9Y483 593 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-204ENST00000380393 SMCHD1A6NHR9 2005 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 FAM234BA2RU67 622 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 A6NCN8 305 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 TUBAL3A6NHL2 446 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 G3V2T6 193 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 M0R233 179 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ADAM12O43184 909 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ETV5P41161 510 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 VEGFCP49767 419 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 OSTNP61366 133 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 MADCAM1Q13477 382 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ACER2Q5QJU3 275 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 SAXO2Q658L1 398 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 FAM131AQ6UXB0 335 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 TMEM179Q6ZVK1 233 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 B3GNT8Q7Z7M8 397 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 DENND1CQ8IV53 801 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 OR11H4Q8NGC9 324 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 HMGCLL1Q8TB92 370 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 LRCH3Q96II8 777 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ITCHQ96J02 903 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 MEGF10Q96KG7 1140 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 NKX6-2Q9C056 277 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 RRAGCQ9HB90 399 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 PLAC1Q9HBJ0 212 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ZNF334Q9HCZ1 680 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 VSX1Q9NZR4 365 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 GHRLQ9UBU3 117 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 V9GYH0 126 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 FOCADQ5VW36 1801 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 FAM240BA0A1B0GVZ2 78 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 POM121CA8CG34 1229 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ORC5O43913 435 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 NBNO60934 754 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 H2AFYO75367 372 aaKnown RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 CREG1O75629 220 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 GADD45GO95257 159 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 RAC2P15153 192 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 CHRM3P20309 590 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 GNG10P50151 68 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ACTR1AP61163 376 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 SNRPEP62304 92 aaKnown RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 RAPSNQ13702 412 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ZNF691Q5VV52 312 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 ARHGAP11AQ6P4F7 1023 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 MON1BQ7L1V2 547 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 EIF3MQ7L2H7 374 aaKnown RBP9.09□□□□□ -0.95
PTPRA-204ENST00000380393 NLRC3Q7RTR2 1065 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 DTD1Q8TEA8 209 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 MTERF3Q96E29 417 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 C11orf49Q9H6J7 331 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 NLKQ9UBE8 527 aa9.09□□□□□ -0.95
PTPRA-204ENST00000380393 TMEM233B4DJY2 109 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 PSMD9O00233 223 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 BCKDKO14874 412 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 TXNL1O43396 289 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 GP1BAP07359 652 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 HSD17B1P14061 328 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms