RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 MTPNP58546 118 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 GTF2BQ00403 316 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SOX4Q06945 474 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 IKZF1Q13422 519 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 GTDC1Q4AE62 458 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 FAM76BQ5HYJ3 339 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 PAGE3Q5JUK9 113 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 DGKKQ5KSL6 1271 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 BCL2L15Q5TBC7 163 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 RGMBQ6NW40 437 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ZER1Q7Z7L7 766 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 RNF130Q86XS8 419 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SLC41A1Q8IVJ1 513 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 OR10Q1Q8NGQ4 319 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 QRSL1Q9H0R6 528 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 DNTTIP1Q9H147 329 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 TMEFF2Q9UIK5 374 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 NDRG2Q9UN36 371 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ISM1B1AKI9 464 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 DDX39AO00148 427 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SCAMP1O15126 338 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SLC43A1O75387 559 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 PRKRAO75569 313 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 STSP08842 583 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 CNPP09543 421 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ITGAMP11215 1152 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 HTR1EP28566 365 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 MAGEA12P43365 314 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 PIK3CGP48736 1102 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 DSC2Q02487 901 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SLC3A1Q07837 685 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SPP2Q13103 211 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 TAZQ16635 292 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 KYAT1Q16773 422 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 TIMM50Q3ZCQ8 353 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 FAM74A1Q5RGS3 127 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 DET1Q7L5Y6 550 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 LIMS2Q7Z4I7 341 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 CDKL3Q8IVW4 592 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ADGRG2Q8IZP9 1017 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 TMEM151AQ8N4L1 468 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ATP6V1C2Q8NEY4 427 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 AKR7LQ8NHP1 331 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ARNTL2Q8WYA1 636 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 FAM162AQ96A26 154 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 ZBED6CLQ96FA7 236 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 LURAP1Q96LR2 239 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SSX3Q99909 188 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 CDCA7Q9BWT1 371 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 NKX6-2Q9C056 277 aaPredicted RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 MYEF2Q9P2K5 600 aaKnown RBP8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 SSR3Q9UNL2 185 aa8.27□□□□□ -1.09
NHLRC3-201ENST00000379599 LRP5O75197 1615 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 A0A1W2PQL4 384 aaPredicted RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 A8MXK9 166 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SPP1P10451 314 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 PRF1P14222 555 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 CD19P15391 556 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 UBA1P22314 1058 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 STOMP27105 288 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 APEX1P27695 318 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 EPHA2P29317 976 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 GMPSP49915 693 aaPredicted RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 XKP51811 444 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 CLDN20P56880 219 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SNRPEP62304 92 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 CYP24A1Q07973 514 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 OLIG2Q13516 323 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 MPEG1Q2M385 716 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 KLHL22Q53GT1 634 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 LDLRAD1Q5T700 205 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SH3PXD2AQ5TCZ1 1133 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 OR7E24Q6IFN5 339 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 MOXD1Q6UVY6 613 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 MACC1Q6ZN28 852 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 LARP4Q71RC2 724 aaKnown RBP eCLIP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SPNS2Q8IVW8 549 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 FTMTQ8N4E7 242 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 EFHBQ8N7U6 833 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 DNAAF3Q8N9W5 541 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 WDR20Q8TBZ3 569 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 BARD1Q99728 777 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 VRK1Q99986 396 aaPredicted RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 BARHL1Q9BZE3 327 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 ZCCHC2Q9C0B9 1178 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 CRISPLD1Q9H336 500 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SLC9A8Q9Y2E8 581 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 BCLAF3A2AJT9 711 aaKnown RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SOCS7O14512 581 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 PRPSAP2O60256 369 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 BRINP1O60477 761 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 SUPT7LO94864 414 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 PRAMEF1O95521 474 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 PTHP01270 115 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 HGFP14210 728 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 RHCEP18577 417 aa8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 HOXA13P31271 388 aaPredicted RBP8.26□□□□□ -1.09
NHLRC3-201ENST00000379599 FOXM1Q08050 763 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms