RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 NUAK2Q9H093 628 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 EHD3Q9NZN3 535 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 CRLS1Q9UJA2 301 aa16.1■□□□□ 0.17
PCDHA1-201ENST00000378133 LOC100506127A0A0U1RQW1 187 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 M0R082 166 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 WBP4O75554 376 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 STK16O75716 305 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 WDR47O94967 919 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 DIRAS1O95057 198 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 BPIP17213 487 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 ACRV1P26436 265 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 HOXA9P31269 272 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 ELAVL2Q12926 359 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 CHRNA6Q15825 494 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 KIAA1614Q5VZ46 1190 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 ZNF544Q6NX49 715 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 GATAD2AQ86YP4 633 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 ELMO1Q92556 727 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 USP7Q93009 1102 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 ABCG8Q9H221 673 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 CCDC177Q9NQR7 707 aaPredicted RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 KIF17Q9P2E2 1029 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 TRPS1Q9UHF7 1281 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 SCO2O43819 266 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 PCDHGA12O60330 932 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 PDYNP01213 254 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 HNF1BP35680 557 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 MAGEA2P43356 314 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 RPS14P62263 151 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 CREMQ03060 361 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 TIGD6Q17RP2 521 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 SMU1Q2TAY7 513 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 CCDC71Q8IV32 467 aaPredicted RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 FCGR1BQ92637 280 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 TSSK3Q96PN8 268 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 SNX18Q96RF0 628 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 SIGLEC11Q96RL6 698 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 NXF2Q9GZY0 626 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 SERHLQ9NQF3 203 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 KRT84Q9NSB2 600 aa16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 AFF4Q9UHB7 1163 aaKnown RBP16.09■□□□□ 0.17
PCDHA1-201ENST00000378133 A0A096LPI6 279 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 CLDN9O95484 217 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 COL6A1P12109 1028 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 POLR2EP19388 210 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 C21orf33P30042 268 aaPredicted RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 S100A3P33764 101 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 CDKN2CP42773 168 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 GZMMP51124 257 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 RPP38P78345 283 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 PLD1Q13393 1074 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TAF12Q16514 161 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 CALHM3Q86XJ0 350 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 P3H2Q8IVL5 708 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 ATG16L2Q8NAA4 619 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 POP5Q969H6 163 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 CFHR5Q9BXR6 569 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TM9SF3Q9HD45 589 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 FBXL12Q9NXK8 326 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 OR51B4Q9Y5P0 310 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 GLYATL1P3A0A0U1RQE8 302 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 SSX4O60224 188 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 NBNO60934 754 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 ERN1O75460 977 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 LRATO95237 230 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TRBC1P01850 177 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 DNTTP04053 509 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TACR1P25103 407 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 DNAJA1P31689 397 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 HTR3AP46098 478 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 PLPP6Q8IY26 295 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 APCDD1Q8J025 514 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 SELENOMQ8WWX9 145 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 DNASE1L2Q92874 299 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TBC1D20Q96BZ9 403 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 CPPED1Q9BRF8 314 aaPredicted RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 KCNH6Q9H252 994 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TNKS2Q9H2K2 1166 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 RNF167Q9H6Y7 350 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 NPAP1Q9NZP6 1156 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 MKLN1Q9UL63 735 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 WBP11Q9Y2W2 641 aaKnown RBP16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 PEX16Q9Y5Y5 336 aa16.08■□□□□ 0.16
PCDHA1-201ENST00000378133 TBKBP1A7MCY6 615 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 hCG_2039718K7EN88 272 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 C1QCP02747 245 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 RPLP0P05388 317 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 EPORP19235 508 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 RPIAP49247 311 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 SMAD3P84022 425 aaKnown RBP16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 BCL2L1Q07817 233 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 SPANXN2Q5MJ10 180 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 SLC8B1Q6J4K2 584 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 TTC23LQ6PF05 361 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 OVCA2Q8WZ82 227 aa16.07■□□□□ 0.16
PCDHA1-201ENST00000378133 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms