RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 CHRNA6Q15825 494 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 BCL7AQ4VC05 210 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 ZNF544Q6NX49 715 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.42□□□□□ -0.26
SF1-205ENST00000377394 LRRC8DQ7L1W4 858 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 ADGRG2Q8IZP9 1017 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 ULK4Q96C45 1275 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 BEX2Q9BXY8 128 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 SLC29A3Q9BZD2 475 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 VNN3Q9NY84 501 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 EVPLLA8MZ36 301 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 BCKDKO14874 412 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 STK16O75716 305 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 CCDC159P0C7I6 412 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 GKP32189 559 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 RYKP34925 604 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 HTR2BP41595 481 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 CLDN8P56748 225 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 RPS14P62263 151 aaKnown RBP13.42□□□□□ -0.26
SF1-205ENST00000377394 SLC35A2P78381 396 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 TCTN1Q2MV58 587 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 CDONQ4KMG0 1287 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 ZNF551Q7Z340 670 aaPredicted RBP13.42□□□□□ -0.26
SF1-205ENST00000377394 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 OR10Q1Q8NGQ4 319 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 DNAJB8Q8NHS0 232 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
SF1-205ENST00000377394 PYURFQ96I23 114 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 TMEM175Q9BSA9 504 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 ACOT13Q9NPJ3 140 aa13.42□□□□□ -0.26
SF1-205ENST00000377394 RPRD1BQ9NQG5 326 aaKnown RBP13.42□□□□□ -0.26
SF1-205ENST00000377394 GLYATL1P3A0A0U1RQE8 302 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ARHGEF15O94989 841 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 CLDN9O95484 217 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 PDYNP01213 254 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ZXDCQ2QGD7 858 aaPredicted RBP13.41□□□□□ -0.26
SF1-205ENST00000377394 TBRG1Q3YBR2 411 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ZC3H12BQ5HYM0 836 aaKnown RBP13.41□□□□□ -0.26
SF1-205ENST00000377394 PRSS36Q5K4E3 855 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 PNCKQ6P2M8 343 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 DET1Q7L5Y6 550 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 KIAA1958Q8N8K9 716 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 HTATIP2Q9BUP3 242 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
SF1-205ENST00000377394 MMP27Q9H306 513 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 SATB2Q9UPW6 733 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 WBP11Q9Y2W2 641 aaKnown RBP13.41□□□□□ -0.26
SF1-205ENST00000377394 SCN8AQ9UQD0 1980 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 GFRA2O00451 464 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 DSCR3O14972 297 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 EFEMP2O95967 443 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 LIPAP38571 399 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 CDKN2CP42773 168 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 MAGEA2P43356 314 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 PLD1Q13393 1074 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 CPSF6Q16630 551 aaKnown RBP eCLIP13.41□□□□□ -0.26
SF1-205ENST00000377394 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 NRARPQ7Z6K4 114 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 ANKRD46Q86W74 232 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 HIPK1Q86Z02 1210 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 APCDD1Q8J025 514 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 FYTTD1Q96QD9 318 aaKnown RBP13.41□□□□□ -0.26
SF1-205ENST00000377394 DHRS9Q9BPW9 319 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 LATS2Q9NRM7 1088 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 EHD3Q9NZN3 535 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 CRLS1Q9UJA2 301 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 PPT2Q9UMR5 302 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 PCDHGB6Q9Y5F9 930 aa13.41□□□□□ -0.26
SF1-205ENST00000377394 LINC00854A0A1B0GVQ3 168 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 KRT87PA6NCN2 255 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 GREM1O60565 184 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 TACR1P25103 407 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 CPZQ66K79 652 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 GLRX5Q86SX6 157 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 NXPE1Q8N323 547 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 DCAF4L2Q8NA75 395 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ZNF540Q8NDQ6 660 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ZNF566Q969W8 418 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 REXO5Q96IC2 774 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 BARD1Q99728 777 aaKnown RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 CDADC1Q9BWV3 514 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 PRRG3Q9BZD7 231 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 DUSP21Q9H596 190 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 ERVK13-1Q9NX77 482 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 RABL2AQ9UBK7 228 aaPredicted RBP13.4□□□□□ -0.26
SF1-205ENST00000377394 LRFN2Q9ULH4 789 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.4□□□□□ -0.26
SF1-205ENST00000377394 KCNE1BA0A087WTH5 132 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 C12orf71A8MTZ7 269 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 WNT9AO14904 365 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 PER2O15055 1255 aa13.4□□□□□ -0.26
SF1-205ENST00000377394 RECQL5O94762 991 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms