RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 EIF3FO00303 357 aaPredicted RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 DNALI1O14645 258 aaPredicted RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 PCDH17O14917 1159 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 FOXS1O43638 330 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 LDLRP01130 860 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 UQCRHP07919 91 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 PRR35P0CG20 571 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 PGAM1P18669 254 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 FDXRP22570 491 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 IMPA1P29218 277 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 EEF1A2Q05639 463 aaKnown RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 PCGF5Q86SE9 256 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 LRRC56Q8IYG6 542 aaPredicted RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 PRAP1Q96NZ9 151 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 AARSD1Q9BTE6 412 aaKnown RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 TGIF2Q9GZN2 237 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 CCDC177Q9NQR7 707 aaPredicted RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 IARS2Q9NSE4 1012 aaKnown RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 RIC8BQ9NVN3 520 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 PTGFRNQ9P2B2 879 aa19.98■□□□□ 0.79
VSX1-201ENST00000376707 TRMT6Q9UJA5 497 aaKnown RBP19.98■□□□□ 0.79
VSX1-201ENST00000376707 WIPF3A6NGB9 483 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 USP27XA6NNY8 438 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 P2RX6O15547 441 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 TTC4O95801 387 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 SERPINA7P05543 415 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 HRH2P25021 359 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 IVDP26440 423 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 AVPR1BP47901 424 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 ARG2P78540 354 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 FAM53BQ14153 422 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 CRYMQ14894 314 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 SYT16Q17RD7 645 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 LRRC8EQ6NSJ5 796 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 UGT3A1Q6NUS8 523 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 MAMDC2Q7Z304 686 aaPredicted RBP19.97■□□□□ 0.79
VSX1-201ENST00000376707 ARHGEF39Q8N4T4 335 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 CATSPER1Q8NEC5 780 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 GABPB2Q8TAK5 448 aaPredicted RBP19.97■□□□□ 0.79
VSX1-201ENST00000376707 MCOLN3Q8TDD5 553 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 BRIX1Q8TDN6 353 aaKnown RBP19.97■□□□□ 0.79
VSX1-201ENST00000376707 NAT9Q9BTE0 207 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 ASIC3Q9UHC3 531 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 MKL2Q9ULH7 1088 aa19.97■□□□□ 0.79
VSX1-201ENST00000376707 IGHV1-45A0A0A0MS14 117 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 A0A1W2PQ72 361 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 DYTNA2CJ06 578 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 RGS4P49798 205 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 TBPL1P62380 186 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 MAT1AQ00266 395 aaKnown RBP19.96■□□□□ 0.79
VSX1-201ENST00000376707 FAM180AQ6UWF9 173 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 ZC3H7AQ8IWR0 971 aaKnown RBP19.96■□□□□ 0.79
VSX1-201ENST00000376707 PALM2Q8IXS6 379 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 C2CD4AQ8NCU7 369 aaPredicted RBP19.96■□□□□ 0.79
VSX1-201ENST00000376707 OR1N1Q8NGS0 311 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 FAR1Q8WVX9 515 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 PDLIM2Q96JY6 352 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 NDNQ99608 321 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 TMEM184CQ9NVA4 438 aa19.96■□□□□ 0.79
VSX1-201ENST00000376707 WFS1O76024 890 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 BMP10O95393 424 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 STATHP02808 62 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 EDN3P14138 238 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 SOX11P35716 441 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 RPS15AP62244 130 aaKnown RBP19.95■□□□□ 0.78
VSX1-201ENST00000376707 DHX9Q08211 1270 aaKnown RBP19.95■□□□□ 0.78
VSX1-201ENST00000376707 MSS51Q4VC12 460 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 RIPOR1Q6ZS17 1223 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 SYDE1Q6ZW31 735 aaPredicted RBP19.95■□□□□ 0.78
VSX1-201ENST00000376707 CREG2Q8IUH2 290 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 CNTN4Q8IWV2 1026 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 SIRT6Q8N6T7 355 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 OR9A4Q8NGU2 314 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 EEF1AKMT1Q8WVE0 214 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 PSMF1Q92530 271 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 CCDC138Q96M89 665 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 PCBD2Q9H0N5 130 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 TAS2R13Q9NYV9 303 aa19.95■□□□□ 0.78
VSX1-201ENST00000376707 MRPS2Q9Y399 296 aaKnown RBP19.95■□□□□ 0.78
VSX1-201ENST00000376707 DOCK10Q96BY6 2186 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 E2F3O00716 465 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 CLDN1O95832 211 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 C8GP07360 202 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 AP2B1P63010 937 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 SPANXN3Q5MJ09 141 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 RPUSD3Q6P087 351 aaKnown RBP19.94■□□□□ 0.78
VSX1-201ENST00000376707 MYO1HQ8N1T3 1032 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 METTL21AQ8WXB1 218 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 MAGEB10Q96LZ2 347 aaPredicted RBP19.94■□□□□ 0.78
VSX1-201ENST00000376707 RUNDC3BQ96NL0 473 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 ZNF700Q9H0M5 742 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 PLA2G3Q9NZ20 509 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 ADAMTS6Q9UKP5 1117 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 PDE10AQ9Y233 779 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 OSGIN2Q9Y236 505 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 HIVEP3Q5T1R4 2406 aa19.94■□□□□ 0.78
VSX1-201ENST00000376707 KCNE1BA0A087WTH5 132 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 NBPF19A0A087WUL8 3843 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 LOC102723996A0A087X1L8 192 aa19.93■□□□□ 0.78
VSX1-201ENST00000376707 H0YIG0 161 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms