RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 IL17FQ96PD4 163 aa10.7□□□□□ -0.7
PDPN-202ENST00000376057 TMEM168Q9H0V1 697 aa10.7□□□□□ -0.7
PDPN-202ENST00000376057 RNPEPL1Q9HAU8 725 aa10.7□□□□□ -0.7
PDPN-202ENST00000376057 IMP3Q9NV31 184 aaKnown RBP10.7□□□□□ -0.7
PDPN-202ENST00000376057 ADAM29Q9UKF5 820 aa10.7□□□□□ -0.7
PDPN-202ENST00000376057 PCDHA9Q9Y5H5 950 aa10.7□□□□□ -0.7
PDPN-202ENST00000376057 TRIOBPQ9H2D6 2365 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 PDZK1P1A8MUH7 402 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 A8MUI8 341 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 TNFSF14O43557 240 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 TBX19O60806 448 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 CDH1P12830 882 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 RAE1P78406 368 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 PWP1Q13610 501 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 KPNB1Q14974 876 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 IKBIPQ70UQ0 350 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 OR8J2Q8NGG1 315 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 WDR60Q8WVS4 1066 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 MTFMTQ96DP5 389 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 ASB9Q96DX5 294 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 MTERF3Q96E29 417 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 DUS3LQ96G46 650 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 MYOCQ99972 504 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 MOSPD1Q9UJG1 213 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 NUMA1Q14980 2115 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 CLEC3AO75596 197 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 BCAS2O75934 225 aaPredicted RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 CSF2P04141 144 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 HNRNPH1P31943 449 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 AHRP35869 848 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 RPL3P39023 403 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 EEFSECP57772 596 aaKnown RBP10.69□□□□□ -0.7
PDPN-202ENST00000376057 ZXDAP98168 799 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 CEACAM7Q14002 265 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 KRT33BQ14525 404 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 TMEM31Q5JXX7 168 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 LRIF1Q5T3J3 769 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 THEMIS2Q5TEJ8 643 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 DLEU7Q6UYE1 221 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 RIPOR1Q6ZS17 1223 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 VN1R5Q7Z5H4 357 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 OR8J3Q8NGG0 315 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 AHSPQ9NZD4 102 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 TAC3Q9UHF0 121 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 MCM8Q9UJA3 840 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 PLAGL1Q9UM63 463 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 DLGAP4Q9Y2H0 992 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 ENTPD2Q9Y5L3 495 aa10.69□□□□□ -0.7
PDPN-202ENST00000376057 ACOT8O14734 319 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 NME1P15531 152 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 CD38P28907 300 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 TIA1P31483 386 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDPN-202ENST00000376057 ACTR1BP42025 376 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ACTR1AP61163 376 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 CSNK1G2P78368 415 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ACSM2AQ08AH3 577 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ZIC1Q15915 447 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ACSM2BQ68CK6 577 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ZNF425Q6IV72 752 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 DUS1LQ6P1R4 473 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 C11orf74Q86VG3 221 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 AMIGO1Q86WK6 493 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 HID1Q8IV36 788 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PHACTR4Q8IZ21 702 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 SLC13A3Q8WWT9 602 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 SH3KBP1Q96B97 665 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 CLPTM1LQ96KA5 538 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 HBEGFQ99075 208 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 SNX7Q9UNH6 387 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 CFAP20Q9Y6A4 193 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 PCM1Q15154 2024 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 OR52A4PA6NMU1 304 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 AXIN1O15169 862 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PSMG1O95456 288 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PGRP06401 933 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 CHRM5P08912 532 aaPredicted RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 HOXB9P17482 250 aaPredicted RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 SLC6A2P23975 617 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 SLC19A1P41440 591 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 TSFMP43897 325 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 RPS13P62277 151 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 BNIP2Q12982 314 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 TRIM25Q14258 630 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 TMEM35AQ53FP2 167 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 C1orf146Q5VVC0 180 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PTRH1Q86Y79 214 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 TBC1D19Q8N5T2 526 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 NATD1Q8N6N6 113 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 FLVCR1-AS1Q8TAF5 88 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 ZUFSPQ96AP4 578 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 COQ8BQ96D53 544 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 THAP11Q96EK4 314 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 MTERF1Q99551 399 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 KCNH6Q9H252 994 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 RMND5AQ9H871 391 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 PRMT8Q9NR22 394 aaPredicted RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 TAAR2Q9P1P5 351 aa10.68□□□□□ -0.7
PDPN-202ENST00000376057 STX18Q9P2W9 335 aaKnown RBP10.68□□□□□ -0.7
PDPN-202ENST00000376057 ATP6V1HQ9UI12 483 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms