RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SMAD9O15198 467 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 BMP2P12643 396 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TCF3P15923 654 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HTR1EP28566 365 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 MAGEA3P43357 314 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 STK19P49842 368 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 KHKP50053 298 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF155Q12901 538 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TUBA3CQ13748 450 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 CLCA4Q14CN2 919 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SPATS1Q496A3 300 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SYCE2Q6PIF2 218 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF433Q8N7K0 673 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 MDGA1Q8NFP4 955 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PIGXQ8TBF5 258 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OR8D1Q8WZ84 308 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 CIDECQ96AQ7 238 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TTYH2Q9BSA4 534 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PTBP2Q9UKA9 531 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 RUVBL1Q9Y265 456 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PCDHGB5Q9Y5G0 923 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 FAM240BA0A1B0GVZ2 78 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 A0A1W2PQ72 361 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 A0A1W2PRU2 124 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HMX2A2RU54 273 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 F2P00734 622 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PRPS1L1P21108 318 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 DSTNP60981 165 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 FCHO2Q0JRZ9 810 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 CARD16Q5EG05 197 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 RPS26P11Q5JNZ5 115 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 IGFN1Q86VF2 1251 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 LAPTM4BQ86VI4 370 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 IQCHQ86VS3 1027 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PSD4Q8NDX1 1056 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OR4K1Q8NGD4 311 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OR8J3Q8NGG0 315 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OLIG1Q8TAK6 271 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 DNASE1L2Q92874 299 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 NUS1Q96E22 293 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SLC29A3Q9BZD2 475 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ELAC1Q9H777 363 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 THG1LQ9NWX6 298 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 WDR37Q9Y2I8 494 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM98Q9Y2Y6 226 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OR6C70A6NIJ9 312 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HPRP00739 348 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 FYNP06241 537 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SLC2A2P11168 524 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 MARCH8Q5T0T0 291 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM53Q6P2H8 277 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 CADM2Q8N3J6 435 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 OR51B5Q9H339 312 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF224Q9NZL3 707 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 MTMR11A4FU01 709 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 FGBP02675 491 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 IFNA16P05015 189 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 C8orf89P0DMQ9 161 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TAS2R50P59544 299 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TAZQ16635 292 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ANKDD1AQ495B1 522 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 AGMOQ6ZNB7 445 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 HDDC2Q7Z4H3 204 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SLC7A5P1Q8MH63 180 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 DTWD1Q8N5C7 304 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 FAM129BQ96TA1 746 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 POLR2J2Q9GZM3 115 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SLC22A4Q9H015 551 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 EHD1Q9H4M9 534 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ZDHHC7Q9NXF8 308 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SCN9AQ15858 1988 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 A0A1W2PRB8 838 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 POP4O95707 220 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ENO2P09104 434 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 NR2F6P10588 404 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 PAX3P23760 479 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 TEAD4Q15561 434 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 UBXN11Q5T124 520 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 RGMBQ6NW40 437 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ARMCX6Q7L4S7 300 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 METTL3Q86U44 580 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 ANKRD13BQ86YJ7 626 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 GEMIN6Q8WXD5 167 aaKnown RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 RERGQ96A58 199 aaPredicted RBP6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SMURF1Q9HCE7 757 aa6.35□□□□□ -1.39
SMC1A-202ENST00000375340 SHMT2P34897 504 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 HNMTP50135 292 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PON2Q15165 354 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 PTCHD3Q3KNS1 767 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ADGRF1Q5T601 910 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 LINGO2Q7L985 606 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CARM1Q86X55 608 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 TSSK6Q9BXA6 273 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 POLR2J3Q9H1A7 115 aaKnown RBP6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SEMA3DO95025 777 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 NFATC2Q13469 925 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 SEMA3AQ14563 771 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 ZNF404Q494X3 552 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 CTSL3PQ5NE16 218 aa6.34□□□□□ -1.39
SMC1A-202ENST00000375340 LIPKQ5VXJ0 399 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms