RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PADI1Q9ULC6 663 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 SDK2Q58EX2 2172 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 WDFY3Q8IZQ1 3526 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 SEC16AO15027 2179 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 A0A1W2PPM1 405 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 TRBC2A0A5B9 178 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 TK2O00142 265 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 KLK10O43240 276 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 KLK8O60259 260 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 DLGAP3O95886 979 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 NTRK1P04629 796 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CAPNS1P04632 268 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CD63P08962 238 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 SLC35G6P0C7Q6 338 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 C1GALT1C1LP0DN25 315 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 PIM1P11309 404 aaPredicted RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 MTHFD2P13995 350 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 GSTM2P28161 218 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CRHR1P34998 444 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 EMP3P54852 163 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 UCNP55089 124 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 YBX1P67809 324 aaKnown RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 IRF8Q02556 426 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 PCBP2Q15366 365 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSR4-202ENST00000370085 MUM1Q2TAK8 710 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 XKR6Q5GH73 641 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 WASHC2DQ5SRD0 308 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 MANEAQ5SRI9 462 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 BEND6Q5SZJ8 279 aaPredicted RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 CEP85LQ5SZL2 805 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 ATG9BQ674R7 924 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 FBXO42Q6P3S6 717 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 SRRM1Q8IYB3 904 aaKnown RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CYP4X1Q8N118 509 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CSNK1A1LQ8N752 337 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 PTGR2Q8N8N7 351 aaPredicted RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 CAMKVQ8NCB2 501 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 OR4K1Q8NGD4 311 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 RDH11Q8TC12 318 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 UBE2E3Q969T4 207 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 NAF1Q96HR8 494 aaKnown RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 EFCAB11Q9BUY7 163 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 SPRTNQ9H040 489 aaPredicted RBP13.17□□□□□ -0.3
SSR4-202ENST00000370085 CENPHQ9H3R5 247 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 RAXQ9Y2V3 346 aa13.17□□□□□ -0.3
SSR4-202ENST00000370085 URADA6NGE7 173 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 C9J4A7 227 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 H0YGG7 62 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 PRPF4O43172 522 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-202ENST00000370085 TLX3O43711 291 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 OR1F1O43749 312 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ATP5F1P24539 256 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 AHRP35869 848 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 ARF3P61204 181 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 NAA20P61599 178 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 SKP1P63208 163 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 RGS1Q08116 209 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ZNF844Q08AG5 666 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ZXDCQ2QGD7 858 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 C18orf21Q32NC0 220 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 CATSPEREQ5SY80 951 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 GARNL3Q5VVW2 1013 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 RHBDD2Q6NTF9 364 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 TRABD2AQ86V40 505 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 DTX1Q86Y01 620 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 TEX9Q8N6V9 391 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ZSCAN1Q8NBB4 408 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 MFSD9Q8NBP5 474 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 TRPV3Q8NET8 790 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 PPP4R1Q8TF05 950 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 ATP6V1E2Q96A05 226 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 PTCD3Q96EY7 689 aaKnown RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 SEC16BQ96JE7 1060 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 MAGEB10Q96LZ2 347 aaPredicted RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 ZNF285Q96NJ3 590 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ZIM3Q96PE6 472 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 SARGQ9BW04 601 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 ENAMQ9NRM1 1142 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 CUTCQ9NTM9 273 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 TMEM216Q9P0N5 145 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 NDOR1Q9UHB4 597 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 KCND3Q9UK17 655 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 CDC14AQ9UNH5 594 aa13.16□□□□□ -0.3
SSR4-202ENST00000370085 MAP1BP46821 2468 aaKnown RBP13.16□□□□□ -0.3
SSR4-202ENST00000370085 A0A1B0GX78 115 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms