RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 NOL9Q5SY16 702 aaKnown RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 TSGA13Q96PP4 275 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 WRAP53Q9BUR4 548 aaKnown RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 TNFRSF10DQ9UBN6 386 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 HMGN1P05114 100 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 NCS1P62166 190 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 CREMQ03060 361 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 SLBPQ14493 270 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 SLC30A6Q6NXT4 461 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 RHEBL1Q8TAI7 183 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 RNF31Q96EP0 1072 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 FUBP3Q96I24 572 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 RANBP9Q96S59 729 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 KCNH6Q9H252 994 aa15.48■□□□□ 0.07
COL17A1-202ENST00000369733 NLE1Q9NVX2 485 aaPredicted RBP15.48■□□□□ 0.07
COL17A1-202ENST00000369733 FAM163BP0C2L3 166 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 CHRNA6Q15825 494 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 KLHL24Q6TFL4 600 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 BEND7Q8N7W2 519 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 OR13J1Q8NGT2 312 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 SMG7Q92540 1137 aaKnown RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 LRRC14BA6NHZ5 514 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 CD97P48960 835 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 PLA2G16P53816 162 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 LRRC73Q5JTD7 316 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 NPAS3Q8IXF0 933 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 TMEM106CQ9BVX2 250 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 NENFQ9UMX5 172 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ANKRD66B4E2M5 251 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 SEPT4O43236 478 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 PRAMEF12O95522 483 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 VIPP01282 170 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 PRKAR2AP13861 404 aaKnown RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 NT5EP21589 574 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ARL9Q6T311 187 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF563Q8TA94 476 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 CCDC115Q96NT0 180 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 BRD7Q9NPI1 651 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 RHCGQ9UBD6 479 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 P2RX2Q9UBL9 471 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 RGS17Q9UGC6 210 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 A0A075B6Q4 140 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 KRBA1A5PL33 1030 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF155Q12901 538 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 BORAQ6PGQ7 559 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ENPP6Q6UWR7 440 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 IGFN1Q86VF2 1251 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 IQCHQ86VS3 1027 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 KRTCAP2Q8N6L1 136 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 VRTNQ9H8Y1 702 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 A0A096LPI6 279 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 PRSS51A0A1B0GVH4 220 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 INMT-MINDY4F8WBC2 141 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 CNTN5O94779 1100 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 RAB36O95755 333 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 NCBP2P52298 156 aaKnown RBP eCLIP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 PITX1P78337 314 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ARHGAP1Q07960 439 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 RPA4Q13156 261 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF267Q14586 743 aaPredicted RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 COQ5Q5HYK3 327 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 FAM46CQ5VWP2 391 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 CHST9Q7L1S5 443 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 STX12Q86Y82 276 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 MRGPRX2Q96LB1 330 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF597Q96LX8 424 aa15.47■□□□□ 0.07
COL17A1-202ENST00000369733 ZCCHC3Q9NUD5 404 aaKnown RBP15.47■□□□□ 0.07
COL17A1-202ENST00000369733 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF432O94892 652 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CSKP41240 450 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 AP1S2P56377 157 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF234Q14588 700 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ANKRD26P1Q6NSI1 321 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CHADLQ6NUI6 762 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 DCDC5Q6ZRR9 648 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 TMC8Q8IU68 726 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ELMOD2Q8IZ81 293 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CLDN19Q8N6F1 224 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CHST4Q8NCG5 386 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CEP76Q8TAP6 659 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CNDP2Q96KP4 475 aaKnown RBP15.46■□□□□ 0.07
COL17A1-202ENST00000369733 BHLHE41Q9C0J9 482 aaPredicted RBP15.46■□□□□ 0.07
COL17A1-202ENST00000369733 TMEM39AQ9NV64 488 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 NUP50Q9UKX7 468 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 DNAJC15Q9Y5T4 150 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 MAU2Q9Y6X3 613 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CBSLP0DN79 551 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CBSP35520 551 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 CDKN2DP55273 166 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 C1QTNF8P60827 252 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 PAMR1Q6UXH9 720 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 AKAP1Q92667 903 aaKnown RBP eCLIP15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF778Q96MU6 729 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ERVK13-1Q9NX77 482 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 HCN2Q9UL51 889 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 PI15O43692 258 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 KIAA0513O60268 411 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 OR1E2P47887 323 aa15.46■□□□□ 0.07
COL17A1-202ENST00000369733 ZNF630Q2M218 657 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms