RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SMSP52788 366 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 BNIP1Q12981 228 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 ABCD2Q9UBJ2 740 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 KCNK6Q9Y257 313 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 TMED5Q9Y3A6 229 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 SPEF1Q9Y4P9 236 aa15.29■□□□□ 0.04
NUCKS1-201ENST00000367142 DCDC1P59894 354 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 FRG2Q64ET8 278 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 GRASPQ7Z6J2 395 aaPredicted RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 C1orf52Q8N6N3 182 aaKnown RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 NLGN2Q8NFZ4 835 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TFGQ92734 400 aaPredicted RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 FRG2BQ96QU4 278 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 IQGAP1P46940 1657 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PCBP2Q15366 365 aaKnown RBP eCLIP15.28■□□□□ 0.043e-7■■□□□ 13.7
NUCKS1-201ENST00000367142 DNAAF1Q8NEP3 725 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 C9orf43Q8TAL5 461 aaPredicted RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 KCTD7Q96MP8 289 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TM9SF2Q99805 663 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 LRRC3Q9BY71 257 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 IKZF4Q9H2S9 585 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 FZD8Q9H461 694 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 MALT1Q9UDY8 824 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 A0A1W2PPL8 197 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 SH3D21A4FU49 640 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TRIM64BA6NI03 449 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 FAM170BA6NMN3 283 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PEX10O60683 326 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ENTPD6O75354 484 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 MTX2O75431 263 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 RAB36O95755 333 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TBX18O95935 607 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TYRP14679 529 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ENGP17813 658 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TAS2R39P59534 338 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ST3GAL3Q11203 375 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 DPYSL2Q16555 572 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 BEND4Q6ZU67 534 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ZNF554Q86TJ5 538 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 CLEC4DQ8WXI8 215 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PYCR2Q96C36 320 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PPM1HQ9ULR3 514 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 CDH1P12830 882 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 GJA1P17302 382 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 ST3GAL4Q11206 333 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 PON3Q15166 354 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 DUOXA1Q1HG43 343 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 MFSD2AQ8NA29 543 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC5A11Q8WWX8 675 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 SLC5A7Q9GZV3 580 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TRIM36Q9NQ86 728 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 POFUT2Q9Y2G5 429 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 S100A10P60903 97 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 SIRPB2Q5JXA9 342 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 LGI4Q8N135 537 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 CDK15Q96Q40 435 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 TMEM209Q96SK2 561 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 DTLQ9NZJ0 730 aa15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 EIF3KQ9UBQ5 218 aaKnown RBP15.28■□□□□ 0.04
NUCKS1-201ENST00000367142 A0A1B0GVC2 190 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 NIPSNAP2O75323 286 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 JAM2P57087 298 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 SOWAHAQ2M3V2 549 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 CYP27C1Q4G0S4 372 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 FBXL22Q6P050 247 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 CTU1Q7Z7A3 348 aaKnown RBP15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 CLEC4CQ8WTT0 213 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 EZH1Q92800 747 aaPredicted RBP15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 HHATLQ9HCP6 504 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 TCRBV21S2A2A0A5A6 115 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 ECI2O75521 394 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 PDYNP01213 254 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 HRGP04196 525 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 RPL10P27635 214 aaKnown RBP15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 OR2L2Q8NH16 312 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 PCDH19Q8TAB3 1148 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 PDE7BQ9NP56 450 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 ERVK-18Q9QC07 812 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 PADI2Q9Y2J8 665 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 KIF20BQ96Q89 1820 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 GRHL2Q6ISB3 625 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 TMEM214Q6NUQ4 689 aaKnown RBP15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 C22orf39Q6P5X5 142 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 NAPRTQ6XQN6 538 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 TMEM68Q96MH6 324 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 TIGARQ9NQ88 270 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 TMEM5Q9Y2B1 443 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 IRS2Q9Y4H2 1338 aa15.27■□□□□ 0.04
NUCKS1-201ENST00000367142 C2orf74A8MZ97 194 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 MATN2O00339 956 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 FGF18O76093 207 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 INMTO95050 263 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 MAPK3P27361 379 aaPredicted RBP15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF84P51523 738 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 PAQR7Q86WK9 346 aa15.27■□□□□ 0.03
NUCKS1-201ENST00000367142 IL22RA1Q8N6P7 574 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms