RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 OR2AG2A6NM03 316 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 WWP2O00308 870 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 HLA-DPB1P04440 258 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CPN2P22792 545 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 MAP2K3P46734 347 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SH3BP2P78314 561 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 Q6ZNX1 250 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ELAC1Q9H777 363 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 ZBTB20Q9HC78 741 aaPredicted RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 LRRC14BA6NHZ5 514 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 CAPN3P20807 821 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 GDF5P43026 501 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SMARCD3Q6STE5 483 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 TBX5Q99593 518 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 TP63Q9H3D4 680 aaPredicted RBP13.56□□□□□ -0.24
SMC5-201ENST00000361138 FARSBQ9NSD9 589 aaKnown RBP13.56□□□□□ -0.24
SMC5-201ENST00000361138 ZNF510Q9Y2H8 683 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 GSTM3P21266 225 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 DGKEP52429 567 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SPCS2Q15005 226 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 ZSWIM9Q86XI8 627 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 CORO1BQ9BR76 489 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 INTS6Q9UL03 887 aaKnown RBP13.56□□□□□ -0.24
SMC5-201ENST00000361138 WNT9AO14904 365 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SPATA31D3P0C874 917 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 GADD45AP24522 165 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 RIPPLY1Q0D2K3 151 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 NPRL3Q12980 569 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SPATA31D4Q6ZUB0 917 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 JAZF1Q86VZ6 243 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 GHDCQ8N2G8 530 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 TMEM125Q96AQ2 219 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 S1PR4O95977 384 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 CBSLP0DN79 551 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 CBSP35520 551 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 CDK6Q00534 326 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 PCDH1Q08174 1060 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 ATXN7L2Q5T6C5 722 aaPredicted RBP13.56□□□□□ -0.24
SMC5-201ENST00000361138 USP50Q70EL3 339 aaPredicted RBP13.56□□□□□ -0.24
SMC5-201ENST00000361138 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 TBC1D15Q8TC07 691 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SLC2A13Q96QE2 648 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SMOC2Q9H3U7 446 aa13.56□□□□□ -0.24
SMC5-201ENST00000361138 SAP18O00422 153 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 TLX2O43763 284 aaPredicted RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 AP2S1P53680 142 aaPredicted RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 PTPRCAPQ14761 206 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 OR4D1Q15615 310 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 FRRS1Q6ZNA5 592 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 TMEM102Q8N9M5 508 aaPredicted RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 PLD4Q96BZ4 506 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 BRD7Q9NPI1 651 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 HCN2Q9UL51 889 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 POLR1DQ9Y2S0 133 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 A0A1W2PQ67 120 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 SNAPC5O75971 98 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 SOX14O95416 240 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 FDXRP22570 491 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 CDK5R2Q13319 367 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 PON2Q15165 354 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 TAF13Q15543 124 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 KCNJ8Q15842 424 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 ARFGAP1Q8N6T3 406 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 PAPD5Q8NDF8 572 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 FRS2Q8WU20 508 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 MAELQ96JY0 434 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 FAM83DQ9H4H8 585 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 CALML5Q9NZT1 146 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 TRAV6A0A075B6T7 132 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 B4GAT1O43505 415 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 STSP08842 583 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 AGXTP21549 392 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 CD47Q08722 323 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 MPPE1Q53F39 396 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 NCEH1Q6PIU2 408 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 MZB1Q8WU39 189 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 ENAMQ9NRM1 1142 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 STUB1Q9UNE7 303 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 N6AMT1Q9Y5N5 214 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 NWD2Q9ULI1 1742 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 M0R233 179 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 GRM6O15303 877 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 MRPS14O60783 128 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 DNTTP04053 509 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 ZNF81P51508 661 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 LRRC66Q68CR7 880 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 PAMR1Q6UXH9 720 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 S100A13Q99584 98 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 NAA50Q9GZZ1 169 aaKnown RBP13.55□□□□□ -0.24
SMC5-201ENST00000361138 TMEM27Q9HBJ8 222 aa13.55□□□□□ -0.24
SMC5-201ENST00000361138 KANTRA0A1W2PQU2 76 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms