RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ERVMER34-1Q9H9K5 563 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TM9SF3Q9HD45 589 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 POLMQ9NP87 494 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 MRPL39Q9NYK5 338 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SCML2Q9UQR0 700 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 VPS9D1Q9Y2B5 631 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NOSIPQ9Y314 301 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TNPO3Q9Y5L0 923 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR5K4A6NMS3 321 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ANKRD66B4E2M5 251 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 AP3D1O14617 1153 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 AIREO43918 545 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC25A14O95258 325 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRAMEF12O95522 483 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CPSF4O95639 269 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 VIPP01282 170 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DNTTP04053 509 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 IL6P05231 212 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TALDO1P37837 337 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PURAQ00577 322 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DDX39BQ13838 428 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CTXN3Q4LDR2 81 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NADSYN1Q6IA69 706 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CD300LGQ6UXG3 332 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF767PQ75MW2 155 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TMEM132CQ8N3T6 1108 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PJA1Q8NG27 643 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 KCNJ9Q92806 393 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 RNF170Q96K19 258 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 GDF15Q99988 308 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 MMP27Q9H306 513 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 IFT22Q9H7X7 185 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ELOVL2Q9NXB9 296 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NUDT4Q9NZJ9 180 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DLGAP4Q9Y2H0 992 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NEUROG3Q9Y4Z2 214 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZSWIM8A7E2V4 1837 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 B4GALT3O60512 393 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 BCKDHAP12694 445 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 TACR1P25103 407 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 CD6P30203 668 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC35A2P78381 396 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZXDBP98169 803 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC14A1Q13336 389 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 TP53BP2Q13625 1128 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF404Q494X3 552 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RUNDC3AQ59EK9 446 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 VARS2Q5ST30 1063 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR4F3Q6IEY1 312 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR2T5Q6IEZ7 315 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 PNCKQ6P2M8 343 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SBSNQ6UWP8 590 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF517Q6ZMY9 492 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RNF175Q8N4F7 328 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR2T29Q8NH02 315 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 OR52J3Q8NH60 311 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SELENOMQ8WWX9 145 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SUSD3Q96L08 255 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ADGRE3Q9BY15 652 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 UCK2Q9BZX2 261 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 NUAK2Q9H093 628 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ACOT13Q9NPJ3 140 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 TLR8Q9NR97 1041 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 FBXL12Q9NXK8 326 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPRC5BQ9NZH0 403 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 GRIP1Q9Y3R0 1128 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 KCNE2Q9Y6J6 123 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RALGAPA2Q2PPJ7 1873 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 A8MUA0 341 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 M0QZQ0 153 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 M0R129 80 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 HAS3O00219 553 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 PRAMEF1O95521 474 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 IFNA16P05015 189 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RHOCP08134 193 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 EPB42P16452 691 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 HOXD9P28356 352 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLC6A4P31645 630 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 DGKEP52429 567 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 FCGRTP55899 365 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 HUNKP57058 714 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 YBEYP58557 167 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF45Q02386 682 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 CREMQ03060 361 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF33BQ06732 778 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 STARD3Q14849 445 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RFX4Q33E94 735 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ATXN7L2Q5T6C5 722 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 PDE12Q6L8Q7 609 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 ARSKQ6UWY0 536 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPR149Q86SP6 731 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 RAB43Q86YS6 212 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 LINC00518Q8N0U6 118 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 UTP15Q8TED0 518 aaKnown RBP7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 APOLD1Q96LR9 279 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 CCDC115Q96NT0 180 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 KCNC2Q96PR1 638 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 PANX1Q96RD7 426 aa7.99□□□□□ -1.13
CDC42SE1-201ENST00000357235 TRIB3Q96RU7 358 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms