RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PSMD9O00233 223 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 PABPC4LP0CB38 370 aaKnown RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 CDH11P55287 796 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 NAPRTQ6XQN6 538 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 ZNF598Q86UK7 904 aaKnown RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 PPEF2O14830 753 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 DIRAS1O95057 198 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 ST3GAL3Q11203 375 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 RAB39AQ14964 217 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 PRAMEF14Q5SWL7 426 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 PRAMEF13Q5VWM6 474 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 SYVN1Q86TM6 617 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 THAP6Q8TBB0 222 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 BTBD1Q9H0C5 482 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 DUS2Q9NX74 493 aaKnown RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 COPS7AQ9UBW8 275 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 MRC1P22897 1456 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 WNT9AO14904 365 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 DGKGP49619 791 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 OR12D2P58182 307 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 LYSMD3Q7Z3D4 306 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 IGDCC3Q8IVU1 814 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 C2CD4AQ8NCU7 369 aaPredicted RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 ARMC5Q96C12 935 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 MUS81Q96NY9 551 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 YIPF4Q9BSR8 244 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 ABCB8Q9NUT2 735 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 CYTH4Q9UIA0 394 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 PRSS51A0A1B0GVH4 220 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 KAT7O95251 611 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 CLIC3O95833 236 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 KLK1P06870 262 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 CHRM1P11229 460 aaPredicted RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 F8A1P23610 371 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 STC1P52823 247 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 ARFRP1Q13795 201 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 RBM23Q86U06 439 aaKnown RBP14.44□□□□□ -0.1
CHD4-201ENST00000357008 MCEMP1Q8IX19 187 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 NUDT15Q9NV35 164 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 ST14Q9Y5Y6 855 aa14.44□□□□□ -0.1
CHD4-201ENST00000357008 BHMG1C9JSJ3 638 aaPredicted RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 EPCAMP16422 314 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 GGT5P36269 586 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 CLCN2P51788 898 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 RPL6Q02878 288 aaKnown RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 CHRNA6Q15825 494 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ADGRF1Q5T601 910 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 PYHIN1Q6K0P9 492 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 CEACAM20Q6UY09 585 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 MSANTD1Q6ZTZ1 278 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 SLC15A3Q8IY34 581 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 CREB3L1Q96BA8 519 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 PSKH2Q96QS6 385 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ADAMTS10Q9H324 1103 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 SHPRHQ149N8 1683 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ZNF487B1APH4 448 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 GNB5O14775 395 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 MAGEA12P43365 314 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 RIPPLY1Q0D2K3 151 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 PQLC3Q8N755 202 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 RGS17Q9UGC6 210 aaPredicted RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 HCN2Q9UL51 889 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ZNF541Q9H0D2 1346 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 J3KR12 359 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 SP140Q13342 867 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 KLHL26Q53HC5 615 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 NCCRP1Q6ZVX7 275 aaPredicted RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 NPAS3Q8IXF0 933 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 RIT1Q92963 219 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 POPDC3Q9HBV1 291 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 NEUROD4Q9HD90 331 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ZDHHC4Q9NPG8 344 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 TRIM64CA6NLI5 447 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 AURKAO14965 403 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 ZNF20P17024 532 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 SLC3A1Q07837 685 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 TOR1AIP1Q5JTV8 583 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 GALNT7Q86SF2 657 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 DSG2Q14126 1118 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 EMC10Q5UCC4 262 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 THOC6Q86W42 341 aaKnown RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 PHC2Q8IXK0 858 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 NR4A3Q92570 626 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 SLC22A18Q96BI1 424 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 CCM2LQ9NUG4 571 aaPredicted RBP14.43□□□□□ -0.1
CHD4-201ENST00000357008 PSAT1Q9Y617 370 aa14.43□□□□□ -0.1
CHD4-201ENST00000357008 DFNA5O60443 496 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 APOL3O95236 402 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ALPIP09923 528 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 CYBRD1Q53TN4 286 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 TRMT61BQ9BVS5 477 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 GTPBP2Q9BX10 602 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 FBRSL1Q9HCM7 1045 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 TREM1Q9NP99 234 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 MKS1Q9NXB0 559 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms