RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 UGT2B7P16662 529 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 GPX3P22352 226 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 EPHA8P29322 1005 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 CPA2P48052 419 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 DIO3P55073 304 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 ABATP80404 500 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 EMX2Q04743 252 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 CSTF3Q12996 717 aaKnown RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 CYLC2Q14093 348 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 HIST2H2ACQ16777 129 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 IMPG1Q17R60 797 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 HIST2H2AA3Q6FI13 130 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 TMIGD1Q6UXZ0 262 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 RINLQ6ZS11 566 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 VN1R5Q7Z5H4 357 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 RBM15BQ8NDT2 890 aaKnown RBP17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 AIF1LQ9BQI0 150 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 C1orf50Q9BV19 199 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 ACTR10Q9NZ32 417 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 KLHL20Q9Y2M5 609 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 GPR45Q9Y5Y3 372 aa17.43■□□□□ 0.38
SMARCD3-202ENST00000356800 FRYLO94915 3013 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 FEZF1A0PJY2 475 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 ETHE1O95571 254 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 CMPK1P30085 196 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 KIAA0040Q15053 153 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 MAPRE2Q15555 327 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 C14orf28Q4W4Y0 310 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 C6orf132Q5T0Z8 1188 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 TRIM73Q86UV7 250 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 KRT78Q8N1N4 520 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 MIER2Q8N344 545 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 ANKRD53Q8N9V6 530 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 FNDC5Q8NAU1 212 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 AVL9Q8NBF6 648 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 CEP76Q8TAP6 659 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 REPS1Q96D71 796 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 RAB3IPQ96QF0 476 aaPredicted RBP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 RTKNQ9BST9 563 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 DPH7Q9BTV6 452 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 BRINP2Q9C0B6 783 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 UCK1Q9HA47 277 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 LRTM1Q9HBL6 345 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 AIG1Q9NVV5 245 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 TMEM45AQ9NWC5 275 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 TSC22D4Q9Y3Q8 395 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 GSAPA4D1B5 854 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 TNFRSF10AO00220 468 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 RSL1D1O76021 490 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 EZRP15311 586 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 PRPH2P23942 346 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 CPOXP36551 454 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 RPS13P62277 151 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 C10orf62Q5T681 223 aaPredicted RBP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 ZNF425Q6IV72 752 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 ZFAND4Q86XD8 727 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 SNX32Q86XE0 403 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 GATAD2AQ86YP4 633 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 PLD3Q8IV08 490 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 RSC1A1Q92681 617 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 UBE2E3Q969T4 207 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 SLC22A18Q96BI1 424 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 NT5DC2Q9H857 520 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 BRF2Q9HAW0 419 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 DMRT3Q9NQL9 472 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 TMEM184CQ9NVA4 438 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 HRASLS2Q9NWW9 162 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 C1orf109Q9NX04 203 aa17.42■□□□□ 0.38
SMARCD3-202ENST00000356800 OR5K3A6NET4 321 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 FOXE1O00358 373 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 LCMT2O60294 686 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 SEC22BO75396 215 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 HSD3B1P14060 373 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 TYRP1P17643 537 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 HSD3B2P26439 372 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 GRIA3P42263 894 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 DPP6P42658 865 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 LSSP48449 732 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 PPP1CAP62136 330 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 RPL38P63173 70 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 MAD2L1Q13257 205 aaPredicted RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 RBBP5Q15291 538 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 PDCD4Q53EL6 469 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 TRIM61Q5EBN2 209 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 SLC23A3Q6PIS1 610 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 ZNF438Q7Z4V0 828 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 ADCK2Q7Z695 626 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 RABEPKQ7Z6M1 372 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 SLC35F3Q8IY50 421 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 OR2I1PQ8NGU4 316 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 FBXO27Q8NI29 283 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 SAP25Q8TEE9 199 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 UTP4Q969X6 686 aaKnown RBP17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 CMTM7Q96FZ5 175 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 APIPQ96GX9 242 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 SLC45A3Q96JT2 553 aa17.41■□□□□ 0.38
SMARCD3-202ENST00000356800 PPM1MQ96MI6 270 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms