RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 NUP210Q8TEM1 1887 aaPredicted RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 C7orf72A4D263 438 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 SOCS2O14508 198 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 OR1F1O43749 312 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PGM3O95394 542 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 AMD1P17707 334 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 OLR1P78380 273 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 WLSQ5T9L3 541 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 TBPL2Q6SJ96 375 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 OR13H1Q8NG92 308 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 OR2T3Q8NH03 318 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 OR2L2Q8NH16 312 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 FAM3CQ92520 227 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 LRIG1Q96JA1 1093 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 VPS50Q96JG6 964 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 BMFQ96LC9 184 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 ASB2Q96Q27 587 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 YIPF4Q9BSR8 244 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 TMEM74BQ9NUR3 256 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PIPSLA2A3N6 862 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 BTN3A3O00478 584 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 EIF2S1P05198 315 aaKnown RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 ATP6V1B1P15313 513 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 ACADLP28330 430 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PNLIPRP1P54315 467 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 RAE1P78406 368 aaKnown RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 CTBSQ01459 385 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 DBPQ10586 325 aaPredicted RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 DEFB110Q30KQ9 67 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 CACHD1Q5VU97 1274 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 GLYATQ6IB77 296 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 SLCO4C1Q6ZQN7 724 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 USP7Q93009 1102 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
LSS-201ENST00000356396 VPS29Q9UBQ0 182 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 KLHL3Q9UH77 587 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 PLXNA2O75051 1894 aa13.36□□□□□ -0.27
LSS-201ENST00000356396 C4orf51C9J302 202 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 TAS2R50P59544 299 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 GRSF1Q12849 480 aaKnown RBP eCLIP13.35□□□□□ -0.27
LSS-201ENST00000356396 GPR153Q6NV75 609 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 VTCN1Q7Z7D3 282 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 C17orf62Q9BQA9 187 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 GPATCH1Q9BRR8 931 aaKnown RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 APOOQ9BUR5 198 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 SNX6Q9UNH7 406 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 ZNF451Q9Y4E5 1061 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 ISM1B1AKI9 464 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 NOBOXO60393 691 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 ZNF682O95780 498 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 TBX6O95947 436 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 C5AR1P21730 350 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 PRDX6P30041 224 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 S100A3P33764 101 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 MAPK9P45984 424 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 ID2Q02363 134 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 PLOD1Q02809 727 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 VN1R5Q7Z5H4 357 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 ZNF557Q8N988 423 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 TOE1Q96GM8 510 aaKnown RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 CCDC177Q9NQR7 707 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 DTNAQ9Y4J8 743 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 HCRTR1O43613 425 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 JUPP14923 745 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 TCF3P15923 654 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 COX20Q5RI15 118 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 RNF220Q5VTB9 566 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 PRAMEF13Q5VWM6 474 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 CAPN13Q6MZZ7 669 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 TMEM154Q6P9G4 183 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 COMMD6Q7Z4G1 85 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 SIMC1Q8NDZ2 872 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 WDR20Q8TBZ3 569 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 NETO1Q8TDF5 533 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 GLMNQ92990 594 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 PPP3R2Q96LZ3 170 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 NUSAP1Q9BXS6 441 aaKnown RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 BRINP2Q9C0B6 783 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 CAPN10Q9HC96 672 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 LEF1Q9UJU2 399 aaPredicted RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 EXO1Q9UQ84 846 aaKnown RBP13.35□□□□□ -0.27
LSS-201ENST00000356396 ALPK2Q86TB3 2170 aa13.35□□□□□ -0.27
LSS-201ENST00000356396 IGKV1-8A0A0C4DH67 115 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 FAM234BA2RU67 622 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 CD9P21926 228 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 SOAT1P35610 550 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 GAB1Q13480 694 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 SPIDRQ14159 915 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 PLCL1Q15111 1095 aa13.34□□□□□ -0.27
LSS-201ENST00000356396 TMEM52BQ4KMG9 183 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms