RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RNF39Q9H2S5 420 aa10.52□□□□□ -0.73
SND1-201ENST00000354725 CHMP1AQ9HD42 196 aaPredicted RBP10.52□□□□□ -0.73
SND1-201ENST00000354725 SPAG4Q9NPE6 437 aa10.52□□□□□ -0.73
SND1-201ENST00000354725 COA4Q9NYJ1 87 aa10.52□□□□□ -0.73
SND1-201ENST00000354725 ZNF224Q9NZL3 707 aa10.52□□□□□ -0.73
SND1-201ENST00000354725 AAR2Q9Y312 384 aaKnown RBP10.52□□□□□ -0.73
SND1-201ENST00000354725 TTC24A2A3L6 582 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 BLACEA4D250 179 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 RBP1P09455 135 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 MBL2P11226 248 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 FGFR3P22607 806 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 IGFBP6P24592 240 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 IL12AP29459 219 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 GRK3P35626 688 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 LGALS3BPQ08380 585 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ERV3-1Q14264 604 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ZNF460Q14592 562 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 USP10Q14694 798 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 GTDC1Q4AE62 458 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 CATSPEREQ5SY80 951 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 HTR3DQ70Z44 454 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 OTOP2Q7RTS6 562 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 DNAAF3Q8N9W5 541 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 OR4D10Q8NGI6 311 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 DEDD2Q8WXF8 326 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 LRTOMTQ8WZ04 291 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 BIRC7Q96CA5 298 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 MARK4Q96L34 752 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ASB16Q96NS5 453 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 KCTD14Q9BQ13 255 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 ULBP1Q9BZM6 244 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 CWH43Q9H720 699 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 TMEM161AQ9NX61 479 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 WARS2Q9UGM6 360 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 ZNF639Q9UID6 485 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 TLK1Q9UKI8 766 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 CNOT6Q9ULM6 557 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 A8MT66 165 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 TBX1O43435 398 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ABCB7O75027 752 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 PSIP1O75475 530 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 GJB5O95377 273 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 F9P00740 461 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ENO3P13929 434 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 ALDH4A1P30038 563 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 RPIAP49247 311 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 TAS2R39P59534 338 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 ERVFC1P60507 584 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 RAB14P61106 215 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 TIAL1Q01085 375 aaKnown RBP eCLIP10.51□□□□□ -0.73
SND1-201ENST00000354725 CHST15Q7LFX5 561 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 PTAR1Q7Z6K3 402 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 FAM156AQ8NDB6 213 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 CLP1Q92989 425 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 FKBP10Q96AY3 582 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 MRGPRX2Q96LB1 330 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 LHPPQ9H008 270 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 GOLGA2P5Q9HBQ8 144 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 AGPAT4Q9NRZ5 378 aa10.51□□□□□ -0.73
SND1-201ENST00000354725 CCM2LQ9NUG4 571 aaPredicted RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 YBX2Q9Y2T7 364 aaKnown RBP10.51□□□□□ -0.73
SND1-201ENST00000354725 ZFC3H1O60293 1989 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 FXYD1O00168 92 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 HSD17B1P14061 328 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 TPH1P17752 444 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 AKAP5P24588 427 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 ZFP36L2P47974 494 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 DGKQP52824 942 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SMAD3P84022 425 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 STX5Q13190 355 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 PIN1Q13526 163 aaPredicted RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 MTX3Q5HYI7 312 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 COQ5Q5HYK3 327 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 ESRP1Q6NXG1 681 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 CHRDL2Q6WN34 429 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 NKAIN3Q8N8D7 197 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 PAPD5Q8NDF8 572 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 PNPT1Q8TCS8 783 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 CCDC126Q96EE4 140 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 PCDHAC1Q9H158 963 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 MIR1-1HGQ9H1L0 117 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 OR12D3Q9UGF7 316 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SLC22A14Q9Y267 594 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 ZNF106Q9H2Y7 1883 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 CEP290O15078 2479 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 IPO13O94829 963 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 CCNDBP1O95273 360 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 EPOP01588 193 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 ALDOCP09972 364 aaKnown RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 ARSAP15289 507 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 IL12RB1P42701 662 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 MEOX2P50222 304 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 HLCSP50747 726 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SUOXP51687 545 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 SCAND1P57086 179 aa10.5□□□□□ -0.73
SND1-201ENST00000354725 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
SND1-201ENST00000354725 KRR1Q13601 381 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms