RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 INPP4BO15327 924 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SRP72O76094 671 aaKnown RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PRSS56P0CW18 603 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ALAS2P22557 587 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SPAM1P38567 509 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CASP2P42575 452 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SPINT3P49223 89 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CDKN1CP49918 316 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PLIN5Q00G26 463 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 POU4F1Q01851 419 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 GRSF1Q12849 480 aaKnown RBP eCLIP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TDGQ13569 410 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TUBA3CQ13748 450 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 INSCQ1MX18 579 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 AGKQ53H12 422 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PPP4R4Q6NUP7 873 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF549Q6P9A3 640 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 LDB1Q86U70 411 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ADGRG5Q8IZF4 528 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 FAM9CQ8IZT9 166 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 IL17RCQ8NAC3 791 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SCPEP1Q9HB40 452 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 FARSBQ9NSD9 589 aaKnown RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 C1QTNF3-AMACRE9PGA6 284 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PLIN3O60664 434 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 KRT6AP02538 564 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 KRT6BP04259 564 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ITGALP20701 1170 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CD9P21926 228 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 NTSR1P30989 418 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TTPAP49638 278 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 MRPS21P82921 87 aaKnown RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 IRF9Q00978 393 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TIAL1Q01085 375 aaKnown RBP eCLIP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 NFATC2Q13469 925 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 GPR68Q15743 365 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PTCHD3Q3KNS1 767 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SLC16A12Q6ZSM3 486 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SNX20Q7Z614 316 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TECPR1Q7Z6L1 1165 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 DHFR2Q86XF0 187 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 OR8H2Q8N162 312 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 METTL4Q8N3J2 472 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PNPLA1Q8N8W4 532 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 DLG3Q92796 817 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 C1QTNF1Q9BXJ1 281 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 FBRSQ9HAH7 460 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ERVK13-1Q9NX77 482 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF224Q9NZL3 707 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 FAM50BQ9Y247 325 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 VPS9D1Q9Y2B5 631 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 OR6C70A6NIJ9 312 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SAGE2PA6NJ88 616 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 E5RI56 91 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 KPNA3O00505 521 aaPredicted RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 IL9P15248 144 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CHRM3P20309 590 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TTKP33981 857 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TIE1P35590 1138 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 ST13P50502 369 aaKnown RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 MAPK12P53778 367 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SLAMF1Q13291 335 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CCINQ13939 588 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 GPR33Q49SQ1 333 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TMEM52BQ4KMG9 183 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 LRRC73Q5JTD7 316 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 RBM20Q5T481 1227 aaKnown RBP9.79□□□□□ -0.84
SYNE1-203ENST00000354674 EPGNQ6UW88 154 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CERS6Q6ZMG9 384 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PLD3Q8IV08 490 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CEP97Q8IW35 865 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 CHPFQ8IZ52 775 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SFRP1Q8N474 314 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 MCFD2Q8NI22 146 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PBXIP1Q96AQ6 731 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 MMP28Q9H239 520 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 RAD18Q9NS91 495 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 DCDC2Q9UHG0 476 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 SLC39A10Q9ULF5 831 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 PLXNB3Q9ULL4 1909 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 GLYATL1P3A0A0U1RQE8 302 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 A0A1W2PQF6 199 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 RGS5O15539 181 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 NOBOXO60393 691 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 TNFRSF21O75509 655 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 PRAMEF1O95521 474 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SLC35E2BP0CK96 405 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ADRB3P13945 408 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 CA5AP35218 305 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SEC13P55735 322 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 RAB10P61026 200 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SEMG2Q02383 582 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SLC36A3Q495N2 470 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SOWAHCQ53LP3 525 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FAM46CQ5VWP2 391 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 LYPLAL1Q5VWZ2 237 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 LIPIQ6XZB0 460 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 IDO2Q6ZQW0 420 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ERN2Q76MJ5 926 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms