RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SNAPC1Q16533 368 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 DPY19L1Q2PZI1 675 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 RFLNAQ6ZTI6 216 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 ARRDC2Q8TBH0 407 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 FOXJ1Q92949 421 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 MMABQ96EY8 250 aaPredicted RBP13.28□□□□□ -0.28
SMC6-201ENST00000351948 CWH43Q9H720 699 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 TRPS1Q9UHF7 1281 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 NME7Q9Y5B8 376 aa13.28□□□□□ -0.28
SMC6-201ENST00000351948 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.28
SMC6-201ENST00000351948 DOC2AQ14183 400 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 ABRAXAS2Q15018 415 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 DEFB110Q30KQ9 67 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 CPXM2Q8N436 756 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 CANT1Q8WVQ1 401 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 GIN1Q9NXP7 522 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 KIAA0355O15063 1070 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 VEGFDO43915 354 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 HNRNPCP07910 306 aaKnown RBP eCLIP13.27□□□□□ -0.28
SMC6-201ENST00000351948 ALOX5P09917 674 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 DEFA1P59665 94 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 DEFA3P59666 94 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 CYP27C1Q4G0S4 372 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 NAIF1Q69YI7 327 aaPredicted RBP13.27□□□□□ -0.28
SMC6-201ENST00000351948 OR5AR1Q8NGP9 310 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 DGAT2Q96PD7 388 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 OSBPL11Q9BXB4 747 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 C11orf16Q9NQ32 467 aa13.27□□□□□ -0.28
SMC6-201ENST00000351948 CPSF4LA6NMK7 179 aaKnown RBP13.27□□□□□ -0.29
SMC6-201ENST00000351948 KIF1CO43896 1103 aaKnown RBP13.27□□□□□ -0.29
SMC6-201ENST00000351948 SHMT2P34897 504 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 PTPN5P54829 565 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 ISCA2Q86U28 154 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 ACVR1CQ8NER5 493 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 DEPDC7Q96QD5 511 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 PKP4Q99569 1192 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 OR8D2Q9GZM6 311 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 PAK6Q9NQU5 681 aaPredicted RBP13.27□□□□□ -0.29
SMC6-201ENST00000351948 OARD1Q9Y530 152 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 BRWD3Q6RI45 1802 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 ABLIM3O94929 683 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 AHCYP23526 432 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 IL12RB1P42701 662 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 NNATQ16517 81 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 FAM43BQ6ZT52 329 aaPredicted RBP13.27□□□□□ -0.29
SMC6-201ENST00000351948 CCDC116Q8IYX3 515 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 SFRP1Q8N474 314 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 TRPV3Q8NET8 790 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 GRHL3Q8TE85 626 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 SLC38A4Q969I6 547 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 POPDC3Q9HBV1 291 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 NDUFA13Q9P0J0 144 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 ERGIC3Q9Y282 383 aa13.27□□□□□ -0.29
SMC6-201ENST00000351948 KHNYNO15037 678 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 NME6O75414 186 aaPredicted RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 AK4P27144 223 aaPredicted RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 CTSCP53634 463 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 CEACAM20Q6UY09 585 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 FAM92BQ6ZTR7 304 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 NPAS3Q8IXF0 933 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SLC34A3Q8N130 599 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SCML4Q8N228 414 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SNRNP27Q8WVK2 155 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 MPP4Q96JB8 637 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TRAPPC9Q96Q05 1148 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 KIAA1551Q9HCM1 1747 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ERN1O75460 977 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 PRKD3O94806 890 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TIMP2P16035 220 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 KHKP50053 298 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 CRISP3P54108 245 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 IFI44LQ53G44 452 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TMEM126BQ8IUX1 230 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 FUBP1Q96AE4 644 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TOE1Q96GM8 510 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 ZNF382Q96SR6 550 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ZBTB26Q9HCK0 441 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 ANKRD12Q6UB98 2062 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PRR23D1E9PI22 279 aaPredicted RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 PDLIM1O00151 329 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PRR23D2P0DMB1 279 aaPredicted RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 C1GALT1C1LP0DN25 315 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 HMGA1P17096 107 aaKnown RBP13.26□□□□□ -0.29
SMC6-201ENST00000351948 DSTNP60981 165 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 LIPIQ6XZB0 460 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 AMIGO1Q86WK6 493 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.26□□□□□ -0.292e-6■■■■■ 163.7
SMC6-201ENST00000351948 PGBD5Q8N414 524 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 PTERQ96BW5 349 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 AMBNQ9NP70 447 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 UBXN7O94888 489 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 TALDO1P37837 337 aa13.26□□□□□ -0.29
SMC6-201ENST00000351948 GSK3BP49841 420 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms