RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 AGTR2P50052 363 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF81P51508 661 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 TPI1P60174 286 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 MAPKAPK3Q16644 382 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 TRIQKQ629K1 86 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 MZT2BQ6NZ67 158 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 BMP8AQ7Z5Y6 402 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 CD244Q9BZW8 370 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLC6A15Q9H2J7 730 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SP110Q9HB58 689 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF302Q9NR11 478 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF222Q9UK12 451 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF451Q9Y4E5 1061 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 POLR3HQ9Y535 204 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 NUP214P35658 2090 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 A0A1B0GVM2 712 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 A0A1W2PPL8 197 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 G3V3G9 751 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 LYRM1O43325 122 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLC43A1O75387 559 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 UROSP10746 265 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLC2A2P11168 524 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 SNX16P57768 344 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 RBBP7Q16576 425 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 DUSP6Q16828 381 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 FRMPD2BQ6IN97 320 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 FAM83AQ86UY5 434 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 FBXO39Q8N4B4 442 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 OR6P1Q8NGX9 317 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 USP7Q93009 1102 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 FAM120BQ96EK7 910 aaKnown RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 ZNF419Q96HQ0 510 aaPredicted RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 CDK15Q96Q40 435 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLAMF7Q9NQ25 335 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 SLC6A13Q9NSD5 602 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 CATSPERZQ9NTU4 200 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 GALPQ9UBC7 116 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 NME7Q9Y5B8 376 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 PCDHGA9Q9Y5G4 932 aaKnown RBP12.84□□□□□ -0.35
IFT88-202ENST00000351808 MYLKQ15746 1914 aa12.84□□□□□ -0.35
IFT88-202ENST00000351808 OR51F1A6NGY5 319 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.35
IFT88-202ENST00000351808 CHP2O43745 196 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 ADAM11O75078 769 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 OR4F21O95013 312 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 CDRT1O95170 752 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 PRKAR1AP10644 381 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 PCSK2P16519 638 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 PTX3P26022 381 aaPredicted RBP12.83□□□□□ -0.35
IFT88-202ENST00000351808 EFNA5P52803 228 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 VLDLRP98155 873 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 SNAPC1Q16533 368 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 MLIPQ5VWP3 458 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 OR4F3Q6IEY1 312 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 B3GNT7Q8NFL0 401 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 CDC26Q8NHZ8 85 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 ATOH1Q92858 354 aaPredicted RBP12.83□□□□□ -0.35
IFT88-202ENST00000351808 EXOC2Q96KP1 924 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 ATOH8Q96SQ7 321 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 PIGUQ9H490 435 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 LDAHQ9H6V9 325 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 RGS18Q9NS28 235 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 C1orf109Q9NX04 203 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 THUMPD1Q9NXG2 353 aaKnown RBP12.83□□□□□ -0.35
IFT88-202ENST00000351808 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 RAB23Q9ULC3 237 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 ACSL5Q9ULC5 683 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 BAIAP2Q9UQB8 552 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.35
IFT88-202ENST00000351808 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 CACNG2Q9Y698 323 aa12.83□□□□□ -0.35
IFT88-202ENST00000351808 SIP14410 1827 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 FGF18O76093 207 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 PLATP00750 562 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 MAOBP27338 520 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 GGT2P36268 569 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 CLCN3P51790 818 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 S100A12P80511 92 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 LGALSLQ3ZCW2 172 aaPredicted RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 INO80DQ53TQ3 878 aaPredicted RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 FAM160B1Q5W0V3 765 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 WDR36Q8NI36 951 aaKnown RBP12.83□□□□□ -0.36
IFT88-202ENST00000351808 WBP1Q96G27 269 aa12.83□□□□□ -0.36
IFT88-202ENST00000351808 ZC3HAV1LQ96H79 300 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms