RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ACSL6Q9UKU0 697 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 B3GALT1Q9Y5Z6 326 aa11.35□□□□□ -0.59
SNCA-202ENST00000345009 ANKRD11Q6UB99 2663 aaPredicted RBP11.35□□□□□ -0.59
SNCA-202ENST00000345009 IGF2RP11717 2491 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 FREM2Q5SZK8 3169 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 C9orf172C9J069 976 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 TAPBPO15533 448 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 RRP8O43159 456 aaKnown RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 CPNE3O75131 537 aaKnown RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 SCRG1O75711 98 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 KLK3P07288 261 aaPredicted RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 SPTBP11277 2137 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 ATP5F1P24539 256 aaPredicted RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 HPDP32754 393 aaPredicted RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 GDF5P43026 501 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 ATP1A2P50993 1020 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 ARSFP54793 590 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 ASPHQ12797 758 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 LAPTM5Q13571 262 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 CASP8Q14790 479 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 GRM7Q14831 915 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 PCBP2Q15366 365 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNCA-202ENST00000345009 FBXO42Q6P3S6 717 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 NXPE4Q6UWF7 544 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 SH2D5Q6ZV89 423 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 PAQR7Q86WK9 346 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 C4orf33Q8N1A6 199 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 GOLGA6L1Q8N7Z2 621 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
SNCA-202ENST00000345009 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 TTLQ8NG68 377 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 OR4K1Q8NGD4 311 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 RDH11Q8TC12 318 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 PPP4R1Q8TF05 950 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 NEIL2Q969S2 332 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 UBE2E3Q969T4 207 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 ATP6V1E2Q96A05 226 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 PHF21BQ96EK2 531 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 OR4K3Q96R72 315 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 EHD1Q9H4M9 534 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 PRM3Q9NNZ6 103 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 TMEM216Q9P0N5 145 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 HEATR5BQ9P2D3 2071 aa11.34□□□□□ -0.59
SNCA-202ENST00000345009 IGKV1-8A0A0C4DH67 115 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 TRBC2A0A5B9 178 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ZSCAN9O15535 394 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 CTSVO60911 334 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 STK17BO94768 372 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 EIF2S1P05198 315 aaKnown RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 C1GALT1C1LP0DN25 315 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 MYL2P10916 166 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 GSTM2P28161 218 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 VSX2P58304 361 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 CSNK1G2P78368 415 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 IRF8Q02556 426 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ZXDCQ2QGD7 858 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 C18orf21Q32NC0 220 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 XKR6Q5GH73 641 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 MANEAQ5SRI9 462 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ATG9BQ674R7 924 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 PWWP2BQ6NUJ5 590 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 C6orf15Q6UXA7 325 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 LRRC69Q6ZNQ3 347 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 TMPRSS11BQ86T26 416 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ESX1Q8N693 406 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 TEX9Q8N6V9 391 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 PTGR2Q8N8N7 351 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 CAMKVQ8NCB2 501 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 OR1L3Q8NH93 324 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 MDM1Q8TC05 714 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 CLIP3Q96DZ5 547 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 APOPT1Q96IL0 206 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 SEC16BQ96JE7 1060 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 C17orf62Q9BQA9 187 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 DPH2Q9BQC3 489 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 TMEM79Q9BSE2 394 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 EFCAB11Q9BUY7 163 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ACBD3Q9H3P7 528 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ACTR5Q9H9F9 607 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 APMAPQ9HDC9 416 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 CUEDC1Q9NWM3 386 aaPredicted RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 MKS1Q9NXB0 559 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 PILRAQ9UKJ1 303 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 PADI1Q9ULC6 663 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 SNRNP200O75643 2136 aaKnown RBP11.33□□□□□ -0.6
SNCA-202ENST00000345009 FRYQ5TBA9 3013 aa11.33□□□□□ -0.6
SNCA-202ENST00000345009 COL27A1Q8IZC6 1860 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 PMS2P1A4D2B8 440 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 H0YGG7 62 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 HAT1O14929 419 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ZNF749O43361 778 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 OR1F1O43749 312 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms