RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 EZRP15311 586 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 CXCR2P25025 360 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 EMP2P54851 167 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 ABATP80404 500 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 TAP2Q03519 686 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 KLC1Q07866 573 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 MFAP5Q13361 173 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 HIF1AQ16665 826 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
SGCA-202ENST00000344627 HKDC1Q2TB90 917 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 PRTGQ2VWP7 1150 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 SPANXN3Q5MJ09 141 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 GARNL3Q5VVW2 1013 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 FAAH2Q6GMR7 532 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 MTFR2Q6P444 385 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 FAM180AQ6UWF9 173 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 RIPOR1Q6ZS17 1223 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 PLD3Q8IV08 490 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 KLHL7Q8IXQ5 586 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 BCORP1Q8N888 145 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 FBXO15Q8NCQ5 510 aaPredicted RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 ANP32BQ92688 251 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 C8orf44Q96CB5 159 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 THOC3Q96J01 351 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 C10orf90Q96M02 699 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 PRAP1Q96NZ9 151 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 ZNF160Q9HCG1 818 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 CCDC177Q9NQR7 707 aaPredicted RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 C14orf105Q9NVL8 296 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 MED16Q9Y2X0 877 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 TEX15Q9BXT5 2789 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 SVILO95425 2214 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 UTP20O75691 2785 aaKnown RBP11.8□□□□□ -0.52
SGCA-202ENST00000344627 IGLV3-12A0A075B6K2 115 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 A0A0A6YYC8 382 aaPredicted RBP11.8□□□□□ -0.52
SGCA-202ENST00000344627 DYTNA2CJ06 578 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 I3L1I5 382 aaPredicted RBP11.8□□□□□ -0.52
SGCA-202ENST00000344627 HAT1O14929 419 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 STSP08842 583 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 ACPPP15309 386 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 SKIV2L2P42285 1042 aaKnown RBP11.8□□□□□ -0.52
SGCA-202ENST00000344627 GNG11P61952 73 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 CDC16Q13042 620 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 NDUFA9Q16795 377 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 ZNF425Q6IV72 752 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 LRRC8EQ6NSJ5 796 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 PAQR3Q6TCH7 311 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 KBTBD2Q8IY47 623 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 MYO1HQ8N1T3 1032 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 GPATCH11Q8N954 259 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 C2CD4AQ8NCU7 369 aaPredicted RBP11.8□□□□□ -0.52
SGCA-202ENST00000344627 OR11G2Q8NGC1 345 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 MOCOSQ96EN8 888 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 CNDP1Q96KN2 507 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 CCDC138Q96M89 665 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 NAT9Q9BTE0 207 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 KCNF1Q9H3M0 494 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 ENTPD4Q9Y227 616 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 SCN2AQ99250 2005 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 ICE1Q9Y2F5 2266 aa11.8□□□□□ -0.52
SGCA-202ENST00000344627 DOPEY1Q5JWR5 2465 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 NSG1A0A0A6YYJ2 146 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 TRAV17A0A0B4J275 112 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 CDK2AP1O14519 115 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 AHSGP02765 367 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 C8GP07360 202 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 HIST1H2AGP0C0S8 130 aaPredicted RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 RNF224P0DH78 156 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 HIST1H2ADP20671 130 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 IMPA1P29218 277 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 AVPR1BP47901 424 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 CDKN2DP55273 166 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 EEF1A2Q05639 463 aaKnown RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 NAE1Q13564 534 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 ZRSR2Q15696 482 aaKnown RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
SGCA-202ENST00000344627 MFSD4BQ5TF39 518 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 MBOAT1Q6ZNC8 495 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 LINC00696Q6ZRV3 163 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 NDUFAF7Q7L592 441 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 C17orf64Q86WR6 236 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 GRHL3Q8TE85 626 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 HAS2Q92819 552 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 LINGO1Q96FE5 620 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 CERS2Q96G23 380 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 HIST1H2AHQ96KK5 128 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 OR2A5Q96R48 311 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 HIST1H2AJQ99878 128 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 SLX1AQ9BQ83 275 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 MESP1Q9BRJ9 268 aa11.79□□□□□ -0.52
SGCA-202ENST00000344627 H2AFJQ9BTM1 129 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms