RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 RNF168Q8IYW5 571 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-201ENST00000344626 PIGXQ8TBF5 258 aa15.9■□□□□ 0.14
SMARCA4-201ENST00000344626 MYRFLQ96LU7 910 aa15.9■□□□□ 0.14
SMARCA4-201ENST00000344626 FANCFQ9NPI8 374 aa15.9■□□□□ 0.14
SMARCA4-201ENST00000344626 RIMKLBQ9ULI2 386 aa15.9■□□□□ 0.14
SMARCA4-201ENST00000344626 A0A1B0GTW7 788 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 FOXO6A8MYZ6 492 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 TMCC2O75069 709 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 HOXD9P28356 352 aaPredicted RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 NEK10Q6ZWH5 1172 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 DPPA4Q7L190 304 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 ASPGQ86U10 573 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 HIPK1Q86Z02 1210 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 C17orf62Q9BQA9 187 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 ACTL8Q9H568 366 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 RAPGEFL1Q9UHV5 662 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 ADAMDEC1O15204 470 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 CHRNGP07510 517 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 C1orf53Q5VUE5 145 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 PARS2Q7L3T8 475 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 NEUROD4Q9HD90 331 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 ZIM2Q9NZV7 527 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 CABIN1Q9Y6J0 2220 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 POLR1CO15160 346 aaPredicted RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 MGRN1O60291 552 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 PROS1P07225 676 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 SRP54P61011 504 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 NRF1Q16656 503 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 TSSK4Q6SA08 328 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 NUP54Q7Z3B4 507 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 C12orf40Q86WS4 652 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 CAB39Q9Y376 341 aaPredicted RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 FAM25AB3EWG3 89 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 FAM25CB3EWG5 89 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 FAM25GB3EWG6 89 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 CDC123O75794 336 aaPredicted RBP15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 SLC14A2Q15849 920 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 KLHL12Q53G59 568 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 SLC44A3Q8N4M1 653 aa15.89■□□□□ 0.13
SMARCA4-201ENST00000344626 EIF3FO00303 357 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 IGFBP6P24592 240 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 GRK6P43250 576 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 AFF3P51826 1226 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.88■□□□□ 0.135e-10■■■□□ 16.7
SMARCA4-201ENST00000344626 AP1ARQ63HQ0 302 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 OR56A1Q8NGH5 318 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 NAT6Q93015 286 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 IL17FQ96PD4 163 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 OR8D2Q9GZM6 311 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 A0A087WXM4 84 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 A0A1B0GVT2 93 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 GFRA2O00451 464 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 TRAPPC6AO75865 159 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 HBQ1P09105 142 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 ZCCHC18P0CG32 403 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 C1GALT1C1LP0DN25 315 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 KCNJ5P48544 419 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 DNAJB13P59910 316 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 RPS13P62277 151 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 DECR1Q16698 335 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 C1orf189Q5VU69 101 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 CCSAPQ6IQ19 270 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 RBM12BQ8IXT5 1001 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 OR5M3Q8NGP4 307 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 LDAHQ9H6V9 325 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 P2RX2Q9UBL9 471 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 PISDQ9UG56 409 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 ERGIC3Q9Y282 383 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 TCHHQ07283 1943 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 PLGP00747 810 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 ST13P50502 369 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 RPS15AP62244 130 aaKnown RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 SDR16C5Q8N3Y7 309 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 DUSP23Q9BVJ7 150 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 CRISPLD1Q9H336 500 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 LRCH1Q9Y2L9 728 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 GPR89AB7ZAQ6 455 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 AGPSO00116 658 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 TNFRSF11BO00300 401 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 S1PR4O95977 384 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 GPR89BP0CG08 455 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 NR2F6P10588 404 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 OTX2P32243 289 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 ZNF252P-AS1Q0IIN9 211 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 NFE2L1Q14494 772 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 IFI44LQ53G44 452 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 RHEBL1Q8TAI7 183 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 KLHL6Q8WZ60 621 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 FGF14Q92915 247 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 CMKLR1Q99788 373 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 SLC6A17Q9H1V8 727 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 DNMT3AQ9Y6K1 912 aaPredicted RBP15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 WASF2Q9Y6W5 498 aa15.88■□□□□ 0.13
SMARCA4-201ENST00000344626 A0A0U1RQS6 177 aa15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 FADS2P1A8MWK0 482 aa15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 BHMG1C9JSJ3 638 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 WWP2O00308 870 aa15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 LDOC1O95751 146 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 IL9P15248 144 aa15.87■□□□□ 0.13
SMARCA4-201ENST00000344626 PER3P56645 1201 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms