RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 TCRBV9S1A1TA0A576 114 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 VSTM2BA6NLU5 285 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 PYCARD-AS1I3L0S3 204 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 DPM1O60762 260 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 MED26O95402 600 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 GUCA1CO95843 209 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 PDGFAP04085 211 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 ALPPP05187 535 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 CSRP3P50461 194 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 TAS2R39P59534 338 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 KCNC4Q03721 635 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 SBSNQ6UWP8 590 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 SHISA6Q6ZSJ9 500 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 FRA10AC1Q70Z53 315 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 CYS1Q717R9 158 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 ADAMTSL2Q86TH1 951 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 DTWD1Q8N5C7 304 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 TBC1D19Q8N5T2 526 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 FBXO25Q8TCJ0 367 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 STT3BQ8TCJ2 826 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 MMABQ96EY8 250 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-201ENST00000344376 YIPF2Q9BWQ6 316 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 ATP13A2Q9NQ11 1180 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 TRPC4Q9UBN4 977 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 FER1L5A0AVI2 2057 aa15.3■□□□□ 0.04
ATG4B-201ENST00000344376 KCNE1BA0A087WTH5 132 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 NPEPPSL1A6NEC2 478 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 ZGLP1P0C6A0 271 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CDH1P12830 882 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 STX2P32856 288 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 GP5P40197 560 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 AVPR1BP47901 424 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CCR8P51685 355 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CSNK1G2P78368 415 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 FAM53BQ14153 422 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 ZNF460Q14592 562 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 VWA5B1Q5TIE3 1220 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 IRAK1BP1Q5VVH5 260 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 TMEM207Q6UWW9 146 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CTAGE3PQ8IX95 158 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 GALNT16Q8N428 558 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CAMKVQ8NCB2 501 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 OR56A3Q8NH54 315 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 ZNF592Q92610 1267 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 PYCR2Q96C36 320 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 EGFL8Q99944 293 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 NUDT9Q9BW91 350 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 SYNPO2LQ9H987 977 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 SMYD2Q9NRG4 433 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 C14orf105Q9NVL8 296 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 CTNNAL1Q9UBT7 734 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 FBXL4Q9UKA2 621 aa15.29■□□□□ 0.04
ATG4B-201ENST00000344376 FAM159BA6NKW6 160 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 P2RX6O15547 441 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 NPPBP16860 134 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MAGEA4P43358 317 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 KLC1Q07866 573 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 RAPSNQ13702 412 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 USP10Q14694 798 aaKnown RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MYBPC3Q14896 1274 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 TUBB8Q3ZCM7 444 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 PRSS58Q8IYP2 241 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 RBBP8Q99708 897 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MCMBPQ9BTE3 642 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CLMPQ9H6B4 373 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MKKSQ9NPJ1 570 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 C3orf18Q9UK00 162 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 SH2B3Q9UQQ2 575 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 DYRK1BQ9Y463 629 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MAP4K5Q9Y4K4 846 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 IGLV3-12A0A075B6K2 115 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 A0A0A6YYC8 382 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CXorf49A8MYA2 514 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 I3L1I5 382 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CDC7O00311 574 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 SOCS6O14544 535 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 PIAS1O75925 651 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 IPO13O94829 963 aaKnown RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 TUBB4AP04350 444 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 SLC35G6P0C7Q6 338 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 HNMTP50135 292 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CDKL1Q00532 357 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CSHL1Q14406 222 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 PPP1R3AQ16821 1122 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 ZDHHC24Q6UX98 284 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 VN1R4Q7Z5H5 301 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 ASPGQ86U10 573 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 CEP97Q8IW35 865 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MNS1Q8NEH6 495 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 ABHD11Q8NFV4 315 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 TM9SF4Q92544 642 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 SMAD5Q99717 465 aaKnown RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 DERL2Q9GZP9 239 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 C5AR2Q9P296 337 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 IKZF3Q9UKT9 509 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 MTO1Q9Y2Z2 717 aaKnown RBP15.28■□□□□ 0.04
ATG4B-201ENST00000344376 OARD1Q9Y530 152 aa15.28■□□□□ 0.04
ATG4B-201ENST00000344376 HS3ST3B1Q9Y662 390 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms