RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 ATG9BQ674R7 924 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 CLEC14AQ86T13 490 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 FAM217AQ8IXS0 508 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 CHPT1Q8WUD6 406 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 ANKRD49Q8WVL7 239 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 KAT2AQ92830 837 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 FRMD6Q96NE9 622 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 ZSCAN5AQ9BUG6 496 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 TVP23BQ9NYZ1 205 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 TMEM181Q9P2C4 612 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 PCDHGA8Q9Y5G5 932 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 SPIN1Q9Y657 262 aaPredicted RBP10.59□□□□□ -0.71
RPL28-201ENST00000344063 LOXHD1Q8IVV2 1947 aa10.59□□□□□ -0.71
RPL28-201ENST00000344063 CDRT1O95170 752 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 GADD45GO95257 159 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 BUD31P41223 144 aaPredicted RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 TUBA1BP68363 451 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 IRF5Q13568 498 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SUZ12Q15022 739 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 PAGE3Q5JUK9 113 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TPGS2Q68CL5 300 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TUBA1AQ71U36 451 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 IGSF8Q969P0 613 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 BEX1Q9HBH7 125 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TM9SF3Q9HD45 589 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 FAM120CQ9NX05 1096 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 THUMPD1Q9NXG2 353 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 FLRT1Q9NZU1 646 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 RIMKLBQ9ULI2 386 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 USP22Q9UPT9 525 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 CHURC1-FNTBB4DL54 471 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SLC2A2P11168 524 aaPredicted RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 RAPSNQ13702 412 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 OR4D1Q15615 310 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 UGT8Q16880 541 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 CYP27C1Q4G0S4 372 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 UBXN11Q5T124 520 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 ZFAND4Q86XD8 727 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 PEX5LQ8IYB4 626 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 RPL3LQ92901 407 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 C1QTNF7Q9BXJ2 289 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 OR2B2Q9GZK3 357 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 ANKRA2Q9H9E1 313 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SEMA3GQ9NS98 782 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 MBD2Q9UBB5 411 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 OAS3Q9Y6K5 1087 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 A0A0D9SEW6 157 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 DPP6P42658 865 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SSR2P43308 183 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 LRP8Q14114 963 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SLC36A3Q495N2 470 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 LGI4Q8N135 537 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 DTX3Q8N9I9 347 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 ZFP3Q96NJ6 502 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TTYH1Q9H313 450 aaPredicted RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 SUV39H2Q9H5I1 410 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TRPS1Q9UHF7 1281 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 CD84Q9UIB8 345 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 MKLN1Q9UL63 735 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TCRBV3S1A0A5B6 114 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SHMT2P34897 504 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 FOXA1P55317 472 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 RPL6Q02878 288 aaKnown RBP10.58□□□□□ -0.72
RPL28-201ENST00000344063 GSTM4Q03013 218 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 E2F2Q14209 437 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 NFE2L1Q14494 772 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 UAP1L1Q3KQV9 507 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 FBXO43Q4G163 708 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 KDELC1Q6UW63 502 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SERPINA13PQ6UXR4 307 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SPATC1Q76KD6 591 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SERINC5Q86VE9 423 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 SPNS2Q8IVW8 549 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 DCAF4L2Q8NA75 395 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 ALPK1Q96QP1 1244 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 ANKHQ9HCJ1 492 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 TMEM45AQ9NWC5 275 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 BAIAP2Q9UQB8 552 aa10.58□□□□□ -0.72
RPL28-201ENST00000344063 FAM92AA1XBS5 289 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 FAM47E-STBD1D6RA91 191 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 SLC30A4O14863 429 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 PCDH7O60245 1069 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 SRPRAP08240 638 aaKnown RBP10.57□□□□□ -0.72
RPL28-201ENST00000344063 CKMT1AP12532 417 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 BMP7P18075 431 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 CD40LGP29965 261 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 TLX1P31314 330 aaPredicted RBP10.57□□□□□ -0.72
RPL28-201ENST00000344063 APOFQ13790 326 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 RNF111Q6ZNA4 994 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.57□□□□□ -0.72
RPL28-201ENST00000344063 MMAAQ8IVH4 418 aaKnown RBP10.57□□□□□ -0.72
RPL28-201ENST00000344063 SLC30A8Q8IWU4 369 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 OR2AP1Q8NGE2 309 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 XAGE5Q8WWM1 108 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 OR8D1Q8WZ84 308 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 SLC38A4Q969I6 547 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 CMTM7Q96FZ5 175 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 WACQ9BTA9 647 aa10.57□□□□□ -0.72
RPL28-201ENST00000344063 KCNH6Q9H252 994 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms