RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 H3BM21 787 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 QSOX1O00391 747 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 SPINT1O43278 529 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 FGBP02675 491 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 DPY19L1Q2PZI1 675 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CATSPEREQ5SY80 951 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 ZNF773Q6PK81 442 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 ZZZ3Q8IYH5 903 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CFAP206Q8IYR0 622 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 OR8J2Q8NGG1 315 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 FNDC8Q8TC99 324 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 MAGEB10Q96LZ2 347 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-201ENST00000343916 RDH12Q96NR8 316 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 NFKBIL1Q9UBC1 381 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-201ENST00000343916 DKK3Q9UBP4 350 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 GABRR3A8MPY1 467 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 PRRT4C9JH25 899 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 SOD1P00441 154 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 GBAP04062 536 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 NUDT7P0C024 238 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 ADH5P11766 374 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 VIPR2P41587 438 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 TRPC1P48995 793 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CAMK1Q14012 370 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 VMACQ2NL98 169 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CPZQ66K79 652 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CEP68Q76N32 757 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 PTOV1Q86YD1 416 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 TRAPPC5Q8IUR0 188 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 SYTL1Q8IYJ3 562 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 ARL10Q8N8L6 244 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 CHDHQ8NE62 594 aaPredicted RBP18.69■□□□□ 0.58
COL9A3-201ENST00000343916 OR56A3Q8NH54 315 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 MIPOL1Q8TD10 442 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 RSPRY1Q96DX4 576 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 FAM83CQ9BQN1 747 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 OR2AG1Q9H205 316 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 C3orf18Q9UK00 162 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 FBXO10Q9UK96 956 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 VPS4AQ9UN37 437 aa18.69■□□□□ 0.58
COL9A3-201ENST00000343916 SAMD4AQ9UPU9 718 aaKnown RBP18.69■□□□□ 0.58
COL9A3-201ENST00000343916 LOC100130705A0A1B0GUX0 176 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 ANXA4P09525 319 aaPredicted RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 MATN1P21941 496 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 HNF4AP41235 474 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 MAGEA2P43356 314 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 CD47Q08722 323 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 MSANTD1Q6ZTZ1 278 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 TRIM73Q86UV7 250 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 DCP2Q8IU60 420 aaKnown RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 SFTPA1Q8IWL2 248 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 ZNF480Q8WV37 535 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 FOPNLQ96NB1 174 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 DUSP26Q9BV47 211 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 RAD18Q9NS91 495 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 TCF20Q9UGU0 1960 aaKnown RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 PCM1Q15154 2024 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 MYO1GB0I1T2 1018 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 SCAMP2O15127 329 aaKnown RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 TLL1O43897 1013 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 GPX2P18283 190 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 DCKP27707 260 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 ST8SIA6P61647 398 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 RPS13P62277 151 aaKnown RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 TBPL1P62380 186 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 VLDLRP98155 873 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 IL1RL1Q01638 556 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 XAF1Q6GPH4 301 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 LAIR2Q6ISS4 152 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 DNAJC5GQ8N7S2 189 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 OTUB2Q96DC9 234 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 DTD2Q96FN9 168 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 TPT1P8Q9HAU6 139 aa18.68■□□□□ 0.58
COL9A3-201ENST00000343916 MRPS23Q9Y3D9 190 aaKnown RBP18.68■□□□□ 0.58
COL9A3-201ENST00000343916 GNG14A0A1W2PPG7 69 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 A0A1W2PPW3 197 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 XYLBO75191 536 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 C1orf105O95561 183 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 CPNE6O95741 557 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 NTRK1P04629 796 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 IL1RNP18510 177 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 STARD3Q14849 445 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 FGD3Q5JSP0 725 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 C6orf141Q5SZD1 244 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 BROXQ5VW32 411 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 CYP4Z1Q86W10 505 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 MAL2Q969L2 176 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 LRIG1Q96JA1 1093 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 ZDHHC4Q9NPG8 344 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 IL1RAPQ9NPH3 570 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 FAM120CQ9NX05 1096 aaKnown RBP18.67■□□□□ 0.58
COL9A3-201ENST00000343916 LRRK1Q38SD2 2015 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 OTOL1A6NHN0 477 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-201ENST00000343916 SAP18O00422 153 aaKnown RBP18.67■□□□□ 0.58
COL9A3-201ENST00000343916 MYO1DO94832 1006 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 ABCB1P08183 1280 aaPredicted RBP18.67■□□□□ 0.58
COL9A3-201ENST00000343916 CYP4B1P13584 511 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 KDELR2P33947 212 aa18.67■□□□□ 0.58
COL9A3-201ENST00000343916 SLC6A11P48066 632 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms