RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 PER2O15055 1255 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 POP4O95707 220 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ADRA2AP08913 450 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 LINC00032P0C843 101 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 SPP1P10451 314 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 UMPSP11172 480 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 EDN3P14138 238 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 G0S2P27469 103 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 HIBADHP31937 336 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 GPX4P36969 197 aaPredicted RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 PBX3P40426 434 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 P2RY4P51582 365 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 KCTD2Q14681 263 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ANGPT1Q15389 498 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MPEG1Q2M385 716 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 AP5B1Q2VPB7 878 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 FAM102BQ5T8I3 360 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 KDM4DQ6B0I6 523 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MIER2Q8N344 545 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 QKIQ96PU8 341 aaKnown RBP eCLIP9.38□□□□□ -0.912e-7■■■■□ 26.1
PTCHD4-201ENST00000339488 DMRTA2Q96SC8 542 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MNTQ99583 582 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ASPNQ9BXN1 380 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 NUSAP1Q9BXS6 441 aaKnown RBP9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 C14orf105Q9NVL8 296 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 IMPAD1Q9NX62 359 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 KIF17Q9P2E2 1029 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC9A8Q9Y2E8 581 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 MAB21L2Q9Y586 359 aa9.38□□□□□ -0.91
PTCHD4-201ENST00000339488 ISM1B1AKI9 464 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TARM1B6A8C7 271 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 PIP5K1BO14986 540 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 APOL3O95236 402 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 POLBP06746 335 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 PSAPP07602 524 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 CAV3P56539 151 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 CSHL1Q14406 222 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 COL28A1Q2UY09 1125 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 SYPL2Q5VXT5 272 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 BEND4Q6ZU67 534 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 USP45Q70EL2 814 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 CYS1Q717R9 158 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 OVCH2Q7RTZ1 564 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 PTRH1Q86Y79 214 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 MFSD6LQ8IWD5 586 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 NIPA2Q8N8Q9 360 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 BOLLQ8N9W6 283 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 PHOSPHO1Q8TCT1 267 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 AP2M1Q96CW1 435 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TMEM68Q96MH6 324 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 CMTM3Q96MX0 182 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 MIXL1Q9H2W2 232 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 BEX1Q9HBH7 125 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 B3GAT2Q9NPZ5 323 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 DNAJB9Q9UBS3 223 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TRBV23OR9-2A0A075B6M9 112 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 INMT-MINDY4F8WBC2 141 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC28A1O00337 649 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 IPO13O94829 963 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 ITGB8P26012 769 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 SOX3P41225 446 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 XKP51811 444 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TRAM2Q15035 370 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 P2RY14Q15391 338 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 GTDC1Q4AE62 458 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 ACER2Q5QJU3 275 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 CERCAMQ5T4B2 595 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 SFRP5Q5T4F7 317 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TRNP1Q6NT89 227 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 PROSER1Q86XN7 944 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 DENND6AQ8IWF6 608 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 COLGALT1Q8NBJ5 622 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 BEST4Q8NFU0 473 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 NR4A3Q92570 626 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 WNT2BQ93097 391 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 RAD51AP1Q96B01 352 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 TINF2Q9BSI4 451 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 RHBGQ9H310 441 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 ELAC1Q9H777 363 aaKnown RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF490Q9ULM2 529 aaPredicted RBP9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 SCN4AP35499 1836 aa9.37□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 LOC105369274A0A096LPK9 316 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 M0R233 179 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 HRO43593 1189 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 PRMT3O60678 531 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 RPS6KA4O75676 772 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 SUPT7LO94864 414 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 ANXA6P08133 673 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 HGFP14210 728 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 RHCEP18577 417 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 TPSB2P20231 275 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 TSPAN7P41732 249 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 MAGEA6P43360 314 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 DAPP51397 102 aa9.36□□□□□ -0.91
PTCHD4-201ENST00000339488 UFM1P61960 85 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms