RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 KLHL7Q8IXQ5 586 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 SIRT6Q8N6T7 355 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 SSC4DQ8WTU2 575 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 NACC2Q96BF6 587 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 CAPZA3Q96KX2 299 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 NAP1L3Q99457 506 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 EBNA1BP2Q99848 306 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 PTGFRNQ9P2B2 879 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 TRMT6Q9UJA5 497 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 NXT1Q9UKK6 140 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 SCN2AQ99250 2005 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ANKUB1A6NFN9 424 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 MAP2K7O14733 419 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 IPO13O94829 963 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 B3GALT4O96024 378 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 HPP00738 406 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 HEXBP07686 556 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ENO3P13929 434 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ACPPP15309 386 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 PGAM1P18669 254 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ELK3P41970 407 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 FNTAP49354 379 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 CSNK1G2P78368 415 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ABATP80404 500 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 MEF2AQ02078 507 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 TEDDM1Q5T9Z0 273 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 AGTRAPQ6RW13 159 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 NDUFAF7Q7L592 441 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 KCT2Q8NC54 265 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 OR1N1Q8NGS0 311 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 CALML6Q8TD86 181 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 MCOLN3Q8TDD5 553 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 BRIX1Q8TDN6 353 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 GRHL3Q8TE85 626 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 GRK7Q8WTQ7 553 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 RERGQ96A58 199 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 PYCR2Q96C36 320 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 BARD1Q99728 777 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 WDR77Q9BQA1 342 aaPredicted RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 WDR83Q9BRX9 315 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 TMEM184CQ9NVA4 438 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 CDC14AQ9UNH5 594 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 NUP210LQ5VU65 1888 aa12.68□□□□□ -0.38
NUDCD3-201ENST00000338427 HIVEP3Q5T1R4 2406 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 NSG1A0A0A6YYJ2 146 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 SGK494L7N484 410 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 WISP2O76076 250 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 BMP10O95393 424 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 TSPAN12O95859 305 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 PRR35P0CG20 571 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 ITGAMP11215 1152 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 NPPBP16860 134 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 IL1RNP18510 177 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 BCL6P41182 706 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 EMP3P54852 163 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 TBPL1P62380 186 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 CDC16Q13042 620 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 PTK6Q13882 451 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 DSG2Q14126 1118 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 PCOLCEQ15113 449 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 SPANXN3Q5MJ09 141 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 ARMC3Q5W041 872 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 TMEM207Q6UWW9 146 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 ISLR2Q6UXK2 745 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 ANKMY2Q8IV38 441 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 LMNTD2Q8IXW0 634 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 ZCCHC10Q8TBK6 192 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 TM9SF4Q92544 642 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 MOCOSQ96EN8 888 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 LINGO1Q96FE5 620 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 OLFM1Q99784 485 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 TRIM51Q9BSJ1 452 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 FAM167BQ9BTA0 163 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 SLC29A3Q9BZD2 475 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 DRC3Q9H069 523 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 PPANQ9NQ55 473 aaKnown RBP12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 HCN3Q9P1Z3 774 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 MKL2Q9ULH7 1088 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 CHMP2BQ9UQN3 213 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 COMMD10Q9Y6G5 202 aa12.67□□□□□ -0.38
NUDCD3-201ENST00000338427 IGHV1-45A0A0A0MS14 117 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 ZNF839A8K0R7 811 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 PIAS1O75925 651 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 CLDN1O95832 211 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 ANXA5P08758 320 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 CDH1P12830 882 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 EZRP15311 586 aaKnown RBP12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 CXCR2P25025 360 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 MFAP5Q13361 173 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 ZNF169Q14929 603 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
NUDCD3-201ENST00000338427 IRAK1BP1Q5VVH5 260 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms