RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CCR7P32248 378 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 GSTM5P46439 218 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CDK6Q00534 326 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DCUN1D3Q8IWE4 304 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NATD1Q8N6N6 113 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 BCL7CQ8WUZ0 217 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FER1L6Q2WGJ9 1857 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 COL24A1Q17RW2 1714 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MYOCOSA0A1B0GUC4 107 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CDH15P55291 814 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AFMIDQ63HM1 303 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CROCCP3Q8IVE0 287 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SLC34A3Q8N130 599 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 LOC100506127A0A0U1RQW1 187 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PNMA8CA0A1B0GUJ8 204 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PIPSLA2A3N6 862 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TSPAN19P0C672 248 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DBTP11182 482 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 DSTNP60981 165 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ACVR1Q04771 509 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ATG9BQ674R7 924 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PDPRQ8NCN5 879 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SLC22A18Q96BI1 424 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RHBDF1Q96CC6 855 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PKMYT1Q99640 499 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 XKR8Q9H6D3 395 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 CMTM6Q9NX76 183 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 PCDHB3Q9Y5E6 796 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 APC2O95996 2303 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 KPNA4O00629 521 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 NDUFS2O75306 463 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 LAMP2P13473 410 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 HOXB2P14652 356 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 RIPPLY1Q0D2K3 151 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SCARB2Q14108 478 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 ANKRD26P1Q6NSI1 321 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 TAF8Q7Z7C8 310 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AMER2Q8N7J2 671 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 AVL9Q8NBF6 648 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MYLIPQ8WY64 445 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 GTPBP3Q969Y2 492 aaKnown RBP6.1□□□□□ -1.43
PRKDC-202ENST00000338368 FBXL8Q96CD0 374 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 MYEOVQ96EZ4 313 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 BIRC8Q96P09 236 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 SPATA7Q9P0W8 599 aa6.1□□□□□ -1.43
PRKDC-202ENST00000338368 LAMB2P55268 1798 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 LINC00854A0A1B0GVQ3 168 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 NR2F6P10588 404 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ADRB3P13945 408 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CDH3P22223 829 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 LCN8Q6JVE9 175 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ANKRD33Q7Z3H0 272 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 MAVSQ7Z434 540 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 RASSF5Q8WWW0 418 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PYURFQ96I23 114 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 MUS81Q96NY9 551 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 IL37Q9NZH6 218 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 GSTK1Q9Y2Q3 226 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 SERPINI2O75830 405 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZCCHC10Q8TBK6 192 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CDV3Q9UKY7 258 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 SEC16AO15027 2179 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 LOC100130705A0A1B0GUX0 176 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 FBP2O00757 339 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CLIC3O95833 236 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 NT5EP21589 574 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TUBB3Q13509 450 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 GANABQ14697 944 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CD300LGQ6UXG3 332 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 KRTCAP2Q8N6L1 136 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TMEM245Q9H330 911 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PRDM8Q9NQV8 689 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CTPS2Q9NRF8 586 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PLAGL1Q9UM63 463 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ERGIC3Q9Y282 383 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 EEDO75530 441 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 FPR1P21462 350 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZZZ3Q8IYH5 903 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CLECL1Q8IZS7 167 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 AHCYL2Q96HN2 611 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 SLC38A2Q96QD8 506 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 FARSBQ9NSD9 589 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PTBP2Q9UKA9 531 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 H7C0S8 307 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 FADS2O95864 444 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CSNK2A2P19784 350 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CPN2P22792 545 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 MPIP34949 423 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 COPZ1P61923 177 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ITPRIPL2Q3MIP1 535 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CCSAPQ6IQ19 270 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 GATAD2AQ86YP4 633 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TTLQ8NG68 377 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 FBXL20Q96IG2 436 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 GPR78Q96P69 363 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 RPF2Q9H7B2 306 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 KLHL42Q9P2K6 505 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 DLGAP4Q9Y2H0 992 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 GSTM4Q03013 218 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms