RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 EFCAB11Q9BUY7 163 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 ERVK-6Q9BXR3 956 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 PITHD1Q9GZP4 211 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 SPRTNQ9H040 489 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 NT5DC2Q9H857 520 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 IPPKQ9H8X2 491 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 APMAPQ9HDC9 416 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 SH2B3Q9UQQ2 575 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 B3GALT1Q9Y5Z6 326 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 DMXL1Q9Y485 3027 aa11.41□□□□□ -0.58
SPTLC1-202ENST00000337841 PMS2P1A4D2B8 440 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 LRRC14BA6NHZ5 514 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CDRT15L2A8MXV6 281 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 C9orf172C9J069 976 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 G3V2L1 256 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 H0YGG7 62 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 AGPSO00116 658 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 HAT1O14929 419 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 TM9SF1O15321 606 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 TYROBPO43914 113 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 SCRG1O75711 98 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 SUPT7LO94864 414 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CREB1P16220 341 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ARL1P40616 181 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ARSFP54793 590 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 DNAJB13P59910 316 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ARF3P61204 181 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 MAGOHP61326 146 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 PCDH1Q08174 1060 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 DOC2AQ14183 400 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 GRM7Q14831 915 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 DEFB110Q30KQ9 67 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CFAP157Q5JU67 520 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 MANEAQ5SRI9 462 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 LIPJQ5W064 366 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 PWWP2BQ6NUJ5 590 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 GOLGA7Q7Z5G4 137 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 TMEM126BQ8IUX1 230 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 PLD3Q8IV08 490 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ZNF655Q8N720 491 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CCNYL1Q8N7R7 359 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 TTC29Q8NA56 475 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 MFSD9Q8NBP5 474 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CAMKVQ8NCB2 501 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 TTLQ8NG68 377 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 WDR34Q96EX3 536 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 MAGEB10Q96LZ2 347 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 OR2A5Q96R48 311 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 NDC1Q9BTX1 674 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 SARGQ9BW04 601 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 C1QTNF3Q9BXJ4 246 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 DRC3Q9H069 523 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 C12orf65Q9H3J6 166 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 CCDC86Q9H6F5 360 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 NOL11Q9H8H0 719 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ACTR8Q9H981 624 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 PRM3Q9NNZ6 103 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 OXSMQ9NWU1 459 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 COPG2Q9UBF2 871 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 STK38LQ9Y2H1 464 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 ASB1Q9Y576 335 aa11.4□□□□□ -0.58
SPTLC1-202ENST00000337841 LOC105369274A0A096LPK9 316 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 LOC102723532A0A0G2JNH3 316 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 FEZF1A0PJY2 475 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ANKDD1BA6NHY2 528 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 E2F3O00716 465 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 PRPF4O43172 522 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 LCMT2O60294 686 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 UGDHO60701 494 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 TRIM13O60858 407 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 WFS1O76024 890 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ZWINTO95229 277 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CLDN9O95484 217 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 MLYCDO95822 493 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 OTCP00480 354 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 RPS17P08708 135 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CCNYL3P0C7X3 344 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 AHRP35869 848 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 HNF4AP41235 474 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CCNG1P51959 295 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 REEP5Q00765 189 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 MEF2AQ02078 507 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CLCQ05315 142 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 DNAH14Q0VDD8 3507 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 SLBPQ14493 270 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 RBBP7Q16576 425 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 TBC1D25Q3MII6 688 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 UNC50Q53HI1 259 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF678Q5SXM1 525 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 FRMPD2BQ6IN97 320 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 TMIGD1Q6UXZ0 262 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ASPGQ86U10 573 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 MYLK4Q86YV6 388 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 OR4N4Q8N0Y3 316 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 CSNK1A1LQ8N752 337 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 TRPV3Q8NET8 790 aa11.39□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF483Q8TF39 744 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms