RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 BMP2P12643 396 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 ATP1B2P14415 290 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 HRH2P25021 359 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 HTR7P34969 479 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CTSCP53634 463 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 DGUOKQ16854 277 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 MPPE1Q53F39 396 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CENPSQ8N2Z9 138 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 WDR36Q8NI36 951 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 NFKBIDQ8NI38 313 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 ZNF583Q96ND8 569 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NPLQ9BXD5 320 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 ANKRD60Q9BZ19 345 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 TTTY10Q9BZA0 68 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 TRIM64CA6NLI5 447 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 LEFTY2O00292 366 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 AIREO43918 545 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 PCDH7O60245 1069 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 SNX4O95219 450 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 APOA1P02647 267 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 MT-ND2P03891 347 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 HLA-FP30511 346 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 AP1S1P61966 158 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NKX3-2P78367 333 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 DOC2AQ14183 400 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 INTS11Q5TA45 600 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 DDI2Q5TDH0 399 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 RSBN1Q5VWQ0 802 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 OR2T5Q6IEZ7 315 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 ERAP2Q6P179 960 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NCEH1Q6PIU2 408 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 SBSNQ6UWP8 590 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 THOC6Q86W42 341 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 FAM129CQ86XR2 697 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 IQCF2Q8IXL9 164 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 OR9Q2Q8NGE9 314 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 OR2T29Q8NH02 315 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 BORCS5Q969J3 196 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 ISL2Q96A47 359 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 RHBDF1Q96CC6 855 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 MTERF3Q96E29 417 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CASD1Q96PB1 797 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NUSAP1Q9BXS6 441 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 CACYBPQ9HB71 228 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 TIMMDC1Q9NPL8 285 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 C14orf119Q9NWQ9 140 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 MTRRQ9UBK8 725 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 FBXW2Q9UKT8 454 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CEP250Q9BV73 2442 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 J3KTA2 159 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 GNB5O14775 395 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 KRT75O95678 551 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 IGLV3-25P01717 112 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 FGF4P08620 206 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NR2F1P10589 423 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 PABPC1P11940 636 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 DCTP40126 519 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 SEC13P55735 322 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 GPAT3Q53EU6 434 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 ARHGAP15Q53QZ3 475 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 C2orf27AQ580R0 203 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 LCN8Q6JVE9 175 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 KLHL17Q6TDP4 642 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 VN1R5Q7Z5H4 357 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 WDR53Q7Z5U6 358 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 CARM1Q86X55 608 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 RNF130Q86XS8 419 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 TICAM1Q8IUC6 712 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NAGSQ8N159 534 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 SETD9Q8NE22 299 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 NDNFQ8TB73 568 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 GTF2H4Q92759 462 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CIDECQ96AQ7 238 aaPredicted RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 PYURFQ96I23 114 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 BBS4Q96RK4 519 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 BEX2Q9BXY8 128 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 SAMD4AQ9UPU9 718 aaKnown RBP7.97□□□□□ -1.13
HPS4-201ENST00000336873 SLC9A8Q9Y2E8 581 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CARD8Q9Y2G2 431 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 CCDC88CQ9P219 2028 aa7.97□□□□□ -1.13
HPS4-201ENST00000336873 H7BY64 318 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 STX16O14662 325 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 EEDO75530 441 aaKnown RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 POP4O95707 220 aaKnown RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 PAK4O96013 591 aaPredicted RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 KRT8P05787 483 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 UMPSP11172 480 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 HSD17B1P14061 328 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 ACRV1P26436 265 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 OPRL1P41146 370 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 DSC1Q08554 894 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 ATP6AP1Q15904 470 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 CXorf57Q6NSI4 855 aaKnown RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 SMARCD3Q6STE5 483 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 TPRG1Q6ZUI0 275 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 CELF5Q8N6W0 485 aaKnown RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 HM13Q8TCT9 377 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms