RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 FAM86B1E9PN63 330 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RAD51DO75771 328 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FAM86B2P0C5J1 330 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 IL1R1P14778 569 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SLC6A6P31641 620 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FCGRTP55899 365 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DSTNP60981 165 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CRYZQ08257 329 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SPOCK1Q08629 439 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MEF2DQ14814 521 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CLVS2Q5SYC1 327 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TPGS1Q6ZTW0 290 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF676Q8N7Q3 588 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NEIL3Q8TAT5 605 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SMAP2Q8WU79 429 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 C3orf49Q96BT1 292 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PGAP3Q96FM1 320 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TAAR1Q96RJ0 339 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ITM2CQ9NQX7 267 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NAALAD2Q9Y3Q0 740 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PCYT1BQ9Y5K3 369 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ANKRD33BA6NCL7 494 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SCGB1D2O95969 90 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 USP17L7P0C7H9 530 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PTGIRP43119 386 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PITPNBP48739 271 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CPSF6Q16630 551 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TLDC1Q6P9B6 456 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RAET1EQ8TD07 263 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GTPBP3Q969Y2 492 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 COL26A1Q96A83 441 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CORO1BQ9BR76 489 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TTYH2Q9BSA4 534 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BTBD2Q9BX70 525 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 KLHL9Q9P2J3 617 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MAP4K5Q9Y4K4 846 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TNFRSF10BO14763 440 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 B3GALT2O43825 422 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SEC14L2O76054 403 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SCAF4O95104 1147 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 HSD11B1P28845 292 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 S100A7P31151 101 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DHCR24Q15392 516 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ZACNQ401N2 412 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 C9orf64Q5T6V5 341 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GPR153Q6NV75 609 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 XYLT1Q86Y38 959 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MS4A15Q8N5U1 240 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 F5H5P2 479 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 hCG_2039718K7EN88 272 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 AIPO00170 330 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 WDPCPO95876 746 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BCKDHAP12694 445 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FRKP42685 505 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ABHD18Q0P651 414 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SF3A2Q15428 464 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DOK6Q6PKX4 331 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NPNTQ6UXI9 565 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 S100A7AQ86SG5 101 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 IFNL1Q8IU54 200 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RASGRP3Q8IV61 690 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CLIP4Q8N3C7 705 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 YIPF7Q8N8F6 280 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FANK1Q8TC84 345 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RNF128Q8TEB7 428 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 COQ8BQ96D53 544 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF419Q96HQ0 510 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MYRFLQ96LU7 910 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 C5orf34Q96MH7 638 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 LGMNQ99538 433 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TNKS2Q9H2K2 1166 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GPRC5CQ9NQ84 441 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TAS2R14Q9NYV8 317 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 KIAA1522Q9P206 1035 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NKX1-2Q9UD57 310 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MAFO75444 373 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TPPPO94811 219 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SLC34A2O95436 690 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CAPSQ13938 189 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RNASE12Q5GAN4 147 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SLC15A3Q8IY34 581 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TRIM43Q96BQ3 446 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MRPL45Q9BRJ2 306 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PRDM12Q9H4Q4 367 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 REEP4Q9H6H4 257 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ACOT13Q9NPJ3 140 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GPRC5BQ9NZH0 403 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PPM1HQ9ULR3 514 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 HCN4Q9Y3Q4 1203 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 OR6C6A6NF89 314 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 LYRM1O43325 122 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 B4GALT4O60513 344 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CILPO75339 1184 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 NDST3O95803 873 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RHOQP17081 205 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PTBP1P26599 531 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CAMLGP49069 296 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PPATQ06203 517 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms