RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 LDB1Q86U70 411 aaPredicted RBP16.44■□□□□ 0.22
PDCD1-201ENST00000334409 PIM3Q86V86 326 aa16.44■□□□□ 0.22
PDCD1-201ENST00000334409 PHYKPLQ8IUZ5 450 aa16.44■□□□□ 0.22
PDCD1-201ENST00000334409 PTGR2Q8N8N7 351 aaPredicted RBP16.44■□□□□ 0.22
PDCD1-201ENST00000334409 MAFAQ8NHW3 353 aaPredicted RBP16.44■□□□□ 0.22
PDCD1-201ENST00000334409 FBLIM1Q8WUP2 373 aa16.44■□□□□ 0.22
PDCD1-201ENST00000334409 TMBIM1Q969X1 311 aa16.44■□□□□ 0.22
PDCD1-201ENST00000334409 NTN4Q9HB63 628 aa16.44■□□□□ 0.22
PDCD1-201ENST00000334409 TEX51A0A1B0GUA7 166 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 PNMA8CA0A1B0GUJ8 204 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 UPK1AO00322 258 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 AZIN1O14977 448 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CTSLP07711 333 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 YES1P07947 543 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RAP2AP10114 183 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 SPNP16150 400 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TSPAN8P19075 237 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TIE1P35590 1138 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 LIPEQ05469 1076 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TRAF3Q13114 568 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RFX4Q33E94 735 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 ARMC12Q5T9G4 340 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 STK32CQ86UX6 486 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 METTL4Q8N3J2 472 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 FAM109AQ8N4B1 249 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 PNPLA1Q8N8W4 532 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TWIST2Q8WVJ9 160 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 SGCDQ92629 289 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MARVELD3Q96A59 401 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 BIRC7Q96CA5 298 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 ZHX1-C8orf76Q96EF9 292 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RBM4BQ9BQ04 359 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RBM4Q9BWF3 364 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TFB2MQ9H5Q4 396 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CCNB1IP1Q9NPC3 277 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MKLN1Q9UL63 735 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RIMKLBQ9ULI2 386 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 SPEF1Q9Y4P9 236 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 METTL15A6NJ78 407 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 ANKRD66B4E2M5 251 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 K7EQS6 105 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CDK2AP1O14519 115 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 SHOXO15266 292 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 LEFTY1O75610 366 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 PGLSO95336 258 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 POP4O95707 220 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 EPOP01588 193 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 FGF1P05230 155 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MTHFD1P11586 935 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 HLA-DPA1P20036 260 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CSNK1DP48730 415 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MRPL19P49406 292 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 METAP1P53582 386 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 TIAL1Q01085 375 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CTU2Q2VPK5 515 aaKnown RBP16.43■□□□□ 0.22
PDCD1-201ENST00000334409 C2orf27AQ580R0 203 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 YIF1BQ5BJH7 314 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MRNIPQ6NTE8 343 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 ZNF549Q6P9A3 640 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CACUL1Q86Y37 369 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 STK40Q8N2I9 435 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 MDGA1Q8NFP4 955 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 LGALS12Q96DT0 336 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 NSMCE2Q96MF7 247 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 RNF145Q96MT1 663 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 CCDC90BQ9GZT6 254 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 IL1RL2Q9HB29 575 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 C3orf18Q9UK00 162 aa16.43■□□□□ 0.22
PDCD1-201ENST00000334409 OR51F1A6NGY5 319 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 FZD6O60353 706 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 VPS4BO75351 444 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 MED26O95402 600 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 EGFP01133 1207 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 NPPAP01160 153 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 ZNF37AP17032 561 aaPredicted RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 OGNP20774 298 aaKnown RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 CAPN3P20807 821 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SERPINA4P29622 427 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 S100A5P33763 92 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SEPHS1P49903 392 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 AP2S1P53680 142 aaPredicted RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 CDH13P55290 713 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 CXCR4P61073 352 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 ISL1P61371 349 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 EIF4HQ15056 248 aaKnown RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SMU1Q2TAY7 513 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 FAM98BQ52LJ0 330 aaKnown RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SNAP47Q5SQN1 464 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 ZNF691Q5VV52 312 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 PRR23BQ6ZRT6 265 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 AADATQ8N5Z0 425 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 BEND7Q8N7W2 519 aaPredicted RBP16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SETD9Q8NE22 299 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SETD6Q8TBK2 473 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 PIH1D2Q8WWB5 315 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 TBATAQ96M53 351 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 MBOAT4Q96T53 435 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 ADGRE3Q9BY15 652 aa16.42■□□□□ 0.22
PDCD1-201ENST00000334409 SUV39H2Q9H5I1 410 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms