RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 TMEM59LQ9UK28 342 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 RCCD1A6NED2 376 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NAP1L6A6NFF2 107 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ARPC2O15144 300 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NME6O75414 186 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 MT-ND1P03886 318 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 VTNP04004 478 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CAPN3P20807 821 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ERVK-25P63136 954 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 BAATQ14032 418 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FXNQ16595 210 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 FAM196AQ6ZSG2 479 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TTLL6Q8N841 843 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TXNDC5Q8NBS9 432 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 ABHD11Q8NFV4 315 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 TMEM80Q96HE8 168 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 NIPAL2Q9H841 368 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 CPQQ9Y646 472 aa10.09□□□□□ -0.79
SPTBN1-201ENST00000333896 GXYLT2A0PJZ3 443 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GPR182O15218 404 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 NOBOXO60393 691 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 DLDP09622 509 aaKnown RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CD247P20963 164 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SEMA5AQ13591 1074 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ATXN7L3Q14CW9 347 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 UGT2A3Q6UWM9 527 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 PRSS48Q7RTY5 328 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 BORCS7Q96B45 105 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 RAD9AQ99638 391 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM248Q9NWD8 314 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ZIM2Q9NZV7 527 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 DOCK10Q96BY6 2186 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SFTPBP07988 381 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 YBX3P16989 372 aaKnown RBP eCLIP10.08□□□□□ -0.82e-7■■□□□ 12.2
SPTBN1-201ENST00000333896 MMP8P22894 467 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 C2orf80Q0P641 193 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MFSD3Q96ES6 412 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 LAMP2P13473 410 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 BMP1P13497 986 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ETFAP13804 333 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 AHCYP23526 432 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MASP1P48740 699 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GCNT6Q5T4J0 391 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC35F3Q8IY50 421 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ADAMTS16Q8TE57 1224 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 FRZBQ92765 325 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MRI1Q9BV20 369 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF490Q9ULM2 529 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A1W2PPM1 405 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 AGAP14A8MT82 685 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 KCNJ13O60928 360 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CHRNB2P17787 502 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GK3PQ14409 553 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ARL13AQ5H913 290 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 PET117Q6UWS5 81 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GTF2H5Q6ZYL4 71 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF606Q8WXB4 792 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC35C1Q96A29 364 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CPNE2Q96FN4 548 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 C7orf34Q96L11 122 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 LGMNQ99538 433 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 C12orf57Q99622 126 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TLL1O43897 1013 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MLLT3P42568 568 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MAD2L1BPQ15013 274 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 IGFN1Q86VF2 1251 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SNX29P2Q8IUI4 249 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TWIST2Q8WVJ9 160 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CAMK1GQ96NX5 476 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 MAPKAP1Q9BPZ7 522 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ERVK-6Q9BXR3 956 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 DNTTIP1Q9H147 329 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 PCTPQ9UKL6 214 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 F5H0A9 414 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 H3BSH0 61 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 LRRTM2O43300 516 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 IL1BP01584 269 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 ITGA5P08648 1049 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 USP17L7P0C7H9 530 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 NRIP1P48552 1158 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GBX2P52951 348 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 HERVK_113P63132 956 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC51BQ86UW2 128 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 NRROSQ86YC3 692 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GEMIN6Q8WXD5 167 aaKnown RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 CORO2AQ92828 525 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GPRC5BQ9NZH0 403 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 TEX13CA0A0J9YWL9 993 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 STAG3L1P0CL83 205 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 OPRL1P41146 370 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 GNPDA1P46926 289 aa10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 AFF3P51826 1226 aaKnown RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 NKX2-5P52952 324 aaPredicted RBP10.08□□□□□ -0.8
SPTBN1-201ENST00000333896 PLA2G16P53816 162 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms