RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SLC22A11Q9NSA0 550 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 GIMAP2Q9UG22 337 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 TMEFF2Q9UIK5 374 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ADAM30Q9UKF2 790 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 A0A096LPI6 279 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 MTMR11A4FU01 709 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ERI2A8K979 691 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 KRBOX1C9JBD0 128 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 GRAP2O75791 330 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CXCL14O95715 111 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CST1P01037 141 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF806P0C7X5 589 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RAP2AP10114 183 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 C21orf33P30042 268 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF81P51508 661 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 TSC22D1Q15714 1073 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SPDYE7PQ495Y7 208 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 PABPC1L2AQ5JQF8 200 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 GNASQ5JWF2 1037 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 FSTL5Q8N475 847 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 UBA3Q8TBC4 463 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 NSMAFQ92636 917 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 TRIM43Q96BQ3 446 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 P2RY11Q96G91 374 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CXorf58Q96LI9 332 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 KCTD15Q96SI1 283 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 DPH7Q9BTV6 452 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RIBC2Q9H4K1 309 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CASS4Q9NQ75 786 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ZNF302Q9NR11 478 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 XPR1Q9UBH6 696 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 CDH9Q9ULB4 789 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 ING4Q9UNL4 249 aa11.5□□□□□ -0.57
SHMT2-201ENST00000328923 RUVBL2Q9Y230 463 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 OAS3Q9Y6K5 1087 aaKnown RBP11.5□□□□□ -0.57
SHMT2-201ENST00000328923 A0A1B0GWJ7 208 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 GNGT2O14610 69 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 ANKRD28O15084 1053 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 CLN5O75503 358 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 AP2A1O95782 977 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 PFKMP08237 780 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SLC35E2BP0CK96 405 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SSTR4P31391 388 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 ATP5C1P36542 298 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 GSTM5P46439 218 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 BCAT1P54687 386 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 BPIFB3P59826 476 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 IFRD2Q12894 506 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 NFYCQ13952 458 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 FGL2Q14314 439 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 KCTD2Q14681 263 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 VASNQ6EMK4 673 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 BHLHB9Q6PI77 547 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 FAM131AQ6UXB0 335 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MOB2Q70IA6 237 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 PAQR7Q86WK9 346 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 OR5T2Q8NGG2 359 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 KHSRPQ92945 711 aaKnown RBP eCLIP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 KIAA1191Q96A73 305 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 CCNB1IP1Q9NPC3 277 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 NIT2Q9NQR4 276 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 NLKQ9UBE8 527 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MALT1Q9UDY8 824 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 TSPAN16Q9UKR8 245 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SLC39A10Q9ULF5 831 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 A0A1B0GTQ1 180 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 EFCAB10A6NFE3 127 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 NEMP2A6NFY4 417 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 CHURC1-FNTBB4DL54 471 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 GPX5O75715 221 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 ATG12O94817 140 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 KLK3P07288 261 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SLC10A3P09131 477 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 PFKLP17858 780 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 ACSL1P33121 698 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SCNN1AP37088 669 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 TGM4P49221 684 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 LIMK1P53667 647 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 YWHAHQ04917 246 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 CHRNB3Q05901 458 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 LGALS3BPQ08380 585 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 TARBP2Q15633 366 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 NKG7Q16617 165 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 WSCD2Q2TBF2 565 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 FAM98BQ52LJ0 330 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SLC27A4Q6P1M0 643 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 MPZL3Q6UWV2 235 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 SLC26A9Q7LBE3 791 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 C12orf40Q86WS4 652 aa11.49□□□□□ -0.57
SHMT2-201ENST00000328923 PSTKQ8IV42 348 aaKnown RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 CENPLQ8N0S6 344 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-201ENST00000328923 ITFG1Q8TB96 612 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms