RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FAR1Q8WVX9 515 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 OR4K3Q96R72 315 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 CPEB1Q9BZB8 566 aaKnown RBP16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TRIT1Q9H3H1 467 aaKnown RBP16.83■□□□□ 0.28
COL9A1-201ENST00000320755 REEP1Q9H902 201 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TM9SF3Q9HD45 589 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 SIRT5Q9NXA8 310 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 MGAT4DA6NG13 374 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TRIM64BA6NI03 449 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 MYO1DO94832 1006 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 MPC1LP0DKB6 136 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 DNAJA1P31689 397 aaKnown RBP16.83■□□□□ 0.28
COL9A1-201ENST00000320755 GABARAPL2P60520 117 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 VBP1P61758 197 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ZNF554Q86TJ5 538 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 TRIM74Q86UV6 250 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 ELMOD1Q8N336 334 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 OR52J3Q8NH60 311 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 CLP1Q92989 425 aaKnown RBP16.83■□□□□ 0.28
COL9A1-201ENST00000320755 KLHL42Q9P2K6 505 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 RPS6KA6Q9UK32 745 aa16.83■□□□□ 0.28
COL9A1-201ENST00000320755 CDH23Q9H251 3354 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 FAM20BO75063 409 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 UGT2B11O75310 529 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 RFPL2O75678 378 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 CXCL14O95715 111 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 RYKP34925 604 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 MAGEA2P43356 314 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 GBX1Q14549 363 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 LY6G5CQ5SRR4 150 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 IER5LQ5T953 404 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM215Q68D42 235 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 SLCO6A1Q86UG4 719 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 EGFL6Q8IUX8 553 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 CENPSQ8N2Z9 138 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 SPPL2AQ8TCT8 520 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 VWCEQ96DN2 955 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 LMLNQ96KR4 655 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 SAMD11Q96NU1 681 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 PRDM8Q9NQV8 689 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 TMEM39AQ9NV64 488 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 THUMPD1Q9NXG2 353 aaKnown RBP16.82■□□□□ 0.28
COL9A1-201ENST00000320755 SCN3BQ9NY72 215 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 PPIL1Q9Y3C6 166 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 PLXNB3Q9ULL4 1909 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 M0R3G1 203 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 LAG3P18627 525 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 KREMEN2Q8NCW0 462 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 SETD9Q8NE22 299 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 NDNFQ8TB73 568 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 COX4I2Q96KJ9 171 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 WRAP53Q9BUR4 548 aaKnown RBP16.82■□□□□ 0.28
COL9A1-201ENST00000320755 STOX2Q9P2F5 926 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-201ENST00000320755 ENPP5Q9UJA9 477 aa16.82■□□□□ 0.28
COL9A1-201ENST00000320755 PNMA8BQ9ULN7 279 aaPredicted RBP16.82■□□□□ 0.28
COL9A1-201ENST00000320755 RUVBL1Q9Y265 456 aaKnown RBP16.82■□□□□ 0.28
COL9A1-201ENST00000320755 MT-ND2P03891 347 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 CCDC159P0C7I6 412 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 ACPPP15309 386 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 GPX2P18283 190 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 CRATP43155 626 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 MTAPQ13126 283 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 CTF1Q16619 201 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 PERM1Q5SV97 790 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 KDM4DQ6B0I6 523 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 SLC39A5Q6ZMH5 540 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 DCDC5Q6ZRR9 648 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 AHSA2Q719I0 299 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 NAGSQ8N159 534 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 RASGEF1AQ8N9B8 481 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 C19orf43Q9BQ61 176 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TESMINQ9Y4I5 508 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 PCDHGA10Q9Y5H3 936 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 FGF18O76093 207 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 FPR1P21462 350 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 OR1E2P47887 323 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 MEF2AQ02078 507 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-201ENST00000320755 FPGSQ05932 587 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 ACOX1Q15067 660 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TEAD2Q15562 447 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 LIPJQ5W064 366 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 FAM180BQ6P0A1 224 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 IGFN1Q86VF2 1251 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 SYTL1Q8IYJ3 562 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 WDR20Q8TBZ3 569 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 KCNC2Q96PR1 638 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TPRKBQ9Y3C4 175 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 HCFC2Q9Y5Z7 792 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 EIF3FO00303 357 aaPredicted RBP16.81■□□□□ 0.28
COL9A1-201ENST00000320755 VIPP01282 170 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 ITIH1P19827 911 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 PRPH2P23942 346 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 TGFBR1P36897 503 aa16.81■□□□□ 0.28
COL9A1-201ENST00000320755 RPS13P62277 151 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms