RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CDH3P22223 829 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 GSTM2P28161 218 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 SERPINB1P30740 379 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 CSF2RBP32927 897 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 GRK3P35626 688 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 LSSP48449 732 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
PRPF18-201ENST00000320054 CCL7P80098 99 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 CFHR1Q03591 330 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 IFT88Q13099 833 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 ILKQ13418 452 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 AMZ1Q400G9 498 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 FCRL6Q6DN72 434 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TMEM71Q6P5X7 295 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TMIGD1Q6UXZ0 262 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 FAM20CQ8IXL6 584 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TBC1D19Q8N5T2 526 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 OR7G3Q8NG95 312 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 WDR20Q8TBZ3 569 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TWIST2Q8WVJ9 160 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TGM7Q96PF1 710 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TRAPPC9Q96Q05 1148 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 SPNS1Q9H2V7 528 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 RHBGQ9H310 441 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 KLHL14Q9P2G3 628 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 MARCOQ9UEW3 520 aaPredicted RBP13.06□□□□□ -0.32
PRPF18-201ENST00000320054 ADGRE2Q9UHX3 823 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 TIMM22Q9Y584 194 aa13.06□□□□□ -0.32
PRPF18-201ENST00000320054 A0A1W2PQM1 296 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 FFAR3O14843 346 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 TOX3O15405 576 aaPredicted RBP13.05□□□□□ -0.32
PRPF18-201ENST00000320054 GPR42O15529 346 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 GDF9O60383 454 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 ULK1O75385 1050 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 HSD3B1P14060 373 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 EZRP15311 586 aaKnown RBP13.05□□□□□ -0.32
PRPF18-201ENST00000320054 HSD3B2P26439 372 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 SERPINB3P29508 390 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 SCTRP47872 440 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 ACADVLP49748 655 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 INHBCP55103 352 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 GFERP55789 205 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 RPS15AP62244 130 aaKnown RBP13.05□□□□□ -0.32
PRPF18-201ENST00000320054 USP53Q70EK8 1073 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 PRSS42Q7Z5A4 293 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 ADCK2Q7Z695 626 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 KMT5CQ86Y97 462 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 ZNF740Q8NDX6 193 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 TTLQ8NG68 377 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 TCTN2Q96GX1 697 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 PPM1MQ96MI6 270 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 CCT8L2Q96SF2 557 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 MAP3K3Q99759 626 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 TUBB1Q9H4B7 451 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 NPHS2Q9NP85 383 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 PDP2Q9P2J9 529 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 PPT2Q9UMR5 302 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 FIS1Q9Y3D6 152 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
PRPF18-201ENST00000320054 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 FOXE1O00358 373 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 NTN3O00634 580 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 HAT1O14929 419 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 KIF1CO43896 1103 aaKnown RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 ANKRD34CP0C6C1 535 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PVRP15151 417 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 ST6GAL1P15907 406 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 AHRP35869 848 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PIK3CBP42338 1070 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 HTR6P50406 440 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PHEXP78562 749 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 CBX1P83916 185 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 MEF2AQ02078 507 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 BTKQ06187 659 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PDCD2Q16342 344 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 TCHHL1Q5QJ38 904 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 CACHD1Q5VU97 1274 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 FBXO42Q6P3S6 717 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 FAM92BQ6ZTR7 304 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 RNF44Q7L0R7 432 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 MAVSQ7Z434 540 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 TRIM46Q7Z4K8 759 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 SPATA21Q7Z572 469 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 PIGWQ7Z7B1 504 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 GLRX5Q86SX6 157 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 GBP7Q8N8V2 638 aaPredicted RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 C19orf47Q8N9M1 422 aaKnown RBP13.04□□□□□ -0.32
PRPF18-201ENST00000320054 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
PRPF18-201ENST00000320054 OR4D9Q8NGE8 314 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms