RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LRRC8AQ8IWT6 810 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TUSC5Q8IXB3 177 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 PELI3Q8N2H9 469 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TMCO5AQ8N6Q1 288 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 NHLRC2Q8NBF2 726 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 UXS1Q8NBZ7 420 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 NSMAFQ92636 917 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 HES6Q96HZ4 224 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 FEVQ99581 238 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SEPHS2Q99611 448 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 CACNG6Q9BXT2 260 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 TRPV4Q9HBA0 871 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 RAB9BQ9NP90 201 aa3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SPIN1Q9Y657 262 aaPredicted RBP3.83□□□□□ -1.8
SMCO3-201ENST00000316048 SCN9AQ15858 1988 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GOLGA6L9A6NEM1 432 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 TSPAN1O60635 241 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 KCNJ13O60928 360 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LDB3O75112 727 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 NME6O75414 186 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ASNSP08243 561 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LINC00271P0C7V0 271 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 SKILP12757 684 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 HLA-DOBP13765 273 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GNAZP19086 355 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CDC25AP30304 524 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE2BQ13066 116 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 NR1D2Q14995 579 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 TDRD12Q587J7 1177 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 TCTE1Q5JU00 501 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE2AQ6NT46 116 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MOXD1Q6UVY6 613 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF517Q6ZMY9 492 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 NUP54Q7Z3B4 507 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ARHGAP22Q7Z5H3 698 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PIM3Q86V86 326 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 KLHL7Q8IXQ5 586 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CHCHD4Q8N4Q1 142 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ATAD1Q8NBU5 361 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ZBED3Q96IU2 234 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MTMR9Q96QG7 549 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MLPHQ9BV36 600 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MRPL9Q9BYD2 267 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 NT5C3AQ9H0P0 336 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 BLZF1Q9H2G9 400 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LRRC4Q9HBW1 653 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PCDH9Q9HC56 1237 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 RWDD2AQ9UIY3 292 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CPSF3Q9UKF6 684 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 AMDHD2Q9Y303 409 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ADAMTSL1Q8N6G6 1762 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CNTNAP1P78357 1384 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 SYNRGQ9UMZ2 1314 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 BAZ2BQ9UIF8 2168 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 A0A087WV48 116 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 HYKKA2RU49 373 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 FAM90A10PA6NDY2 464 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PP2D1A8MPX8 630 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CLDN4O14493 209 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF12P17014 697 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CBLP22681 906 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CDC25CP30307 473 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PDLIM4P50479 330 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 MMP15P51511 669 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LIMK1P53667 647 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 SPAG1Q07617 926 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ITGA7Q13683 1181 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 RCN2Q14257 317 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LASP1Q14847 261 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 UBE2SQ16763 222 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A4Q4UJ75 823 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A8PQ5CZ79 823 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A2Q5SQ80 823 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 STXBP5Q5T5C0 1151 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A1Q5TYW2 823 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ANKRD20A3Q5VUR7 823 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 SHEQ5VZ18 495 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 KLHL10Q6JEL2 608 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 C8orf82Q6P1X6 216 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 GFRALQ6UXV0 394 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 CRYBG2Q8N1P7 616 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ARHGAP24Q8N264 748 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ARL10Q8N8L6 244 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ZNF114Q8NC26 417 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 DBF4BQ8NFT6 615 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 ERMNQ8TAM6 284 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PPP4R1Q8TF05 950 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 DHTKD1Q96HY7 919 aaPredicted RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 PLIN2Q99541 437 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 LMF2Q9BU23 707 aaKnown RBP3.82□□□□□ -1.8
SMCO3-201ENST00000316048 HSD3B7Q9H2F3 369 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 VCPKMTQ9H867 229 aa3.82□□□□□ -1.8
SMCO3-201ENST00000316048 TRPC7Q9HCX4 862 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms