RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 BROXQ5VW32 411 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 ZC3HC1Q86WB0 502 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 NLGN4XQ8N0W4 816 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 ACVR2AP27037 513 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 GGT5P36269 586 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 OR2T34Q8NGX1 318 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 HSPA12BQ96MM6 686 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 EIF1AXP47813 144 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 CHAF1BQ13112 559 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 ACSBG2Q5FVE4 666 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 OR4F3Q6IEY1 312 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 RPS27LQ71UM5 84 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 POP5Q969H6 163 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 SLC2A13Q96QE2 648 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 DEFB126Q9BYW3 111 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 FAM234BA2RU67 622 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 M0QZQ0 153 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 AP2A2O94973 939 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 ANPEPP15144 967 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 IFI44LQ53G44 452 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 PACS2Q86VP3 889 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 TRPV1Q8NER1 839 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 OR10H4Q8NGA5 316 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 LPGAT1Q92604 370 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 IL17FQ96PD4 163 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 GFM1Q96RP9 751 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 CENPMQ9NSP4 180 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 NELFEP18615 380 aaKnown RBP13.1□□□□□ -0.31
RFFL-201ENST00000315249 DSTNP60981 165 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 ERVK-8P63133 956 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 RIN1Q13671 783 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 SLC9B1Q4ZJI4 515 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 GPAT4Q86UL3 456 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 PQLC3Q8N755 202 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 FZD4Q9ULV1 537 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 NHSL1Q5SYE7 1610 aa13.1□□□□□ -0.31
RFFL-201ENST00000315249 A0A075B6Q4 140 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 HYKKA2RU49 373 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 CXCR6O00574 342 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 CCNB2O95067 398 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 MAOBP27338 520 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 KCNJ11Q14654 390 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 LASP1Q14847 261 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 CYP1B1Q16678 543 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ARSJQ5FYB0 599 aaPredicted RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 TCEAL6Q6IPX3 200 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 CEACAM20Q6UY09 585 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 GALNTL5Q7Z4T8 443 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 OR7A2PQ8NGA2 310 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 DDX1Q92499 740 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 PLCL2Q9UPR0 1127 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 STX16O14662 325 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PGRMC2O15173 223 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ZNF208O43345 1280 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ITGBL1O95965 494 aaPredicted RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 MATN1P21941 496 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 RNASE12Q5GAN4 147 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 CLEC12AQ5QGZ9 265 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 TTLL10Q6ZVT0 673 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 TSPAN33Q86UF1 283 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 FAM47BQ8NA70 645 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 GATSQ8NAP1 163 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 FAM192AQ9GZU8 254 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PRORSD1PA6NEY8 169 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 GP1BBP13224 206 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 OR4D2P58180 307 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 NNATQ16517 81 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 SLC44A4Q53GD3 710 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 CCDC116Q8IYX3 515 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 OR5T3Q8NGG3 340 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PAIP1Q9H074 479 aaKnown RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 MARCH7Q9H992 704 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ACTL7AQ9Y615 435 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 NUMBLQ9Y6R0 609 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 SEC24AO95486 1093 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ENGP17813 658 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 RNF144AP50876 292 aaPredicted RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 TMEFF1Q8IYR6 380 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 UHRF1Q96T88 793 aaPredicted RBP13.09□□□□□ -0.31
RFFL-201ENST00000315249 CD244Q9BZW8 370 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 FBRSQ9HAH7 460 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 A8MT66 165 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 MNDAP41218 407 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 PPP3R1P63098 170 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 TGFBIQ15582 683 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 ASPGQ86U10 573 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 SFRP1Q8N474 314 aa13.09□□□□□ -0.31
RFFL-201ENST00000315249 SLC46A2Q9BY10 475 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms