RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 TMEM165Q9HC07 324 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 NOP16Q9Y3C1 178 aaKnown RBP12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 SMAD9O15198 467 aaKnown RBP12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 MFSD11O43934 449 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 VAMP1P23763 118 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 NSG1P42857 185 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 ASB18Q6ZVZ8 466 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 FXYD6-FXYD2A0A087WZ82 144 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 ZNF99A8MXY4 864 aaPredicted RBP12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 CD53P19397 219 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 PSPHP78330 225 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 DPYSL2Q16555 572 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 CLNKQ7Z7G1 428 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 VSIG10LQ86VR7 867 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 KREMEN2Q8NCW0 462 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 OR5B17Q8NGF7 314 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 RAB2BQ8WUD1 216 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 CAMK1GQ96NX5 476 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 LPIN3Q9BQK8 851 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 FXYD6Q9H0Q3 95 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 LAMP5Q9UJQ1 280 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 CA14Q9ULX7 337 aa12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
SPTBN2-201ENST00000309996 LOC102723532A0A0G2JNH3 316 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 OR6C70A6NIJ9 312 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 DUXAA6NLW8 204 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TOR1BO14657 336 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 FHP07954 510 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 HOXB2P14652 356 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PRDX6P30041 224 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RBM20Q5T481 1227 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 HACD2Q6Y1H2 254 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 NPAS4Q8IUM7 802 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 NDRG1Q92597 394 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PRR11Q96HE9 360 aaPredicted RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PAPOLGQ9BWT3 736 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CXorf21Q9HAI6 301 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 EIF2B4Q9UI10 523 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RIMS1Q86UR5 1692 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 ABCB7O75027 752 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 ACP5P13686 325 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RHOQP17081 205 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RNF220Q5VTB9 566 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 GLB1L3Q8NCI6 653 aaPredicted RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 C9JVG2 144 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PSMD10O75832 226 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TYRP1P17643 537 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CD83Q01151 205 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TUSC3Q13454 348 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 SCARB2Q14108 478 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 VWA5B1Q5TIE3 1220 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TOMM5Q8N4H5 51 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 MAP3K3Q99759 626 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 UNC93B1Q9H1C4 597 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 MAGED1Q9Y5V3 778 aaPredicted RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PI15O43692 258 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TPPPO94811 219 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RAB36O95755 333 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 GSTT2P0CG29 244 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 S100PP25815 95 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 ZACNQ401N2 412 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 KHDC1LQ5JSQ8 128 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 SPATC1Q76KD6 591 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 MTERF1Q99551 399 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 POLR2J3Q9H1A7 115 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 KCNMB3Q9NPA1 279 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TCAF1Q9Y4C2 921 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 C1orf167Q5SNV9 1468 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 A0A1B0GVI7 797 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 BLOC1S5-TXNDC5H3BN57 136 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 J3QRK9 145 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 EIF4EP06730 217 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CBSLP0DN79 551 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PEPDP12955 493 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CCNCP24863 283 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CBSP35520 551 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 GNA12Q03113 381 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 SLC3A1Q07837 685 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PCBP2Q15366 365 aaKnown RBP eCLIP12.54□□□□□ -0.41e-6■■■■■ 27.4
SPTBN2-201ENST00000309996 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 C6orf120Q7Z4R8 191 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 PTERQ96BW5 349 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TREX2Q9BQ50 279 aaPredicted RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CTPS2Q9NRF8 586 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 OR5H15A6NDH6 313 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 TCAF2A6NFQ2 919 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 OR5H14A6NHG9 310 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 RAD51DO75771 328 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CNOT4O95628 575 aaKnown RBP12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 GNG2P59768 71 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 FKBP1BP68106 108 aa12.54□□□□□ -0.4
SPTBN2-201ENST00000309996 CYP2U1Q7Z449 544 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms