RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC16A5O15375 505 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 PFDN1O60925 122 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 XYLBO75191 536 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 CD247P20963 164 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 KDELR2P33947 212 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 SLC6A11P48066 632 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 NUP107P57740 925 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 MC1RQ01726 317 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 SRSF11Q05519 484 aaKnown RBP11.15□□□□□ -0.62
PTPN2-201ENST00000309660 RAPSNQ13702 412 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 SLBPQ14493 270 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTPN2-201ENST00000309660 GBX1Q14549 363 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 C6orf141Q5SZD1 244 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.15□□□□□ -0.62
PTPN2-201ENST00000309660 DCP2Q8IU60 420 aaKnown RBP11.15□□□□□ -0.62
PTPN2-201ENST00000309660 SVOPLQ8N434 492 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 VPS37AQ8NEZ2 397 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF480Q8WV37 535 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 LHPPQ9H008 270 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 CERS4Q9HA82 394 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 TIMMDC1Q9NPL8 285 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 ACSL6Q9UKU0 697 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 SH2B3Q9UQQ2 575 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 TMEM98Q9Y2Y6 226 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 PCDH7O60245 1069 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 CYP17A1P05093 508 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 CRHBPP24387 322 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 SOAT1P35610 550 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 MMP12P39900 470 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 LSM3P62310 102 aaKnown RBP11.15□□□□□ -0.63
PTPN2-201ENST00000309660 DGCR6Q14129 220 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 OR2T5Q6IEZ7 315 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF740Q8NDX6 193 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 CHDHQ8NE62 594 aaPredicted RBP11.15□□□□□ -0.63
PTPN2-201ENST00000309660 VN1R2Q8NFZ6 395 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 OR4A15Q8NGL6 344 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 OR2T29Q8NH02 315 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 RHBDL2Q9NX52 303 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 MAN2B2Q9Y2E5 1009 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 OBSL1O75147 1896 aa11.15□□□□□ -0.63
PTPN2-201ENST00000309660 PRR23AA6NEV1 266 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 PRRT4C9JH25 899 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 PSIP1O75475 530 aaKnown RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 AP2A2O94973 939 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 KCNK5O95279 499 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 MYOGP15173 224 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CYP4F2P78329 520 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 NFE2L1Q14494 772 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 FAM43BQ6ZT52 329 aaPredicted RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CALHM3Q86XJ0 350 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 OR52J3Q8NH60 311 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 WDR20Q8TBZ3 569 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 BADQ92934 168 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 TMEM121BQ9BXQ6 578 aaPredicted RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 ASF1AQ9Y294 204 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 AP3M1Q9Y2T2 418 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CEP290O15078 2479 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 SCN8AQ9UQD0 1980 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 FABP3P05413 133 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 HNF4AP41235 474 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 WASP42768 502 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 WNT3P56703 355 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 DMC1Q14565 340 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CPZQ66K79 652 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CAPN13Q6MZZ7 669 aaPredicted RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 MED27Q6P2C8 311 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CYP4Z1Q86W10 505 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 HIPK1Q86Z02 1210 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 MMAAQ8IVH4 418 aaKnown RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 ZC3H7AQ8IWR0 971 aaKnown RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 PREBQ9HCU5 417 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 DYRK4Q9NR20 520 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 BLOC1S6Q9UL45 172 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 NOTCH4Q99466 2003 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 LINC00271P0C7V0 271 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 FSHRP23945 695 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 EPHA2P29317 976 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 BMPR1AP36894 532 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 RANBP1P43487 201 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 PRLHRP49683 370 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 GZMMP51124 257 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 CSTF3Q12996 717 aaKnown RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 GAB1Q13480 694 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 DPPA4Q7L190 304 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 TECPR1Q7Z6L1 1165 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 SLC44A2Q8IWA5 706 aaPredicted RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 GLMNQ92990 594 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 SORBS1Q9BX66 1292 aaKnown RBP11.14□□□□□ -0.63
PTPN2-201ENST00000309660 IL23AQ9NPF7 189 aa11.14□□□□□ -0.63
PTPN2-201ENST00000309660 QSOX1O00391 747 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ANGPTL1O95841 491 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 HPRP00739 348 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 TFPTP0C1Z6 253 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ALDH4A1P30038 563 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 OR1E2P47887 323 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms