RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 INPP5KQ9BT40 448 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 PCBD2Q9H0N5 130 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 SLC6A13Q9NSD5 602 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 MMP17Q9ULZ9 603 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TSC22D4Q9Y3Q8 395 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 PCDHB14Q9Y5E9 798 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TCRBV5S2A0A599 114 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TCRBV21S2A2A0A5A6 115 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 GPIP06744 558 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 HRH2P25021 359 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 PSMA4P25789 261 aaKnown RBP20.47■□□□□ 0.87
ATG4D-201ENST00000309469 PIK3CBP42338 1070 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 ASMTP46597 345 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 LRIT3Q3SXY7 679 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 GTDC1Q4AE62 458 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 GLYATQ6IB77 296 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TMIGD1Q6UXZ0 262 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 ANKRD46Q86W74 232 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TRIM69Q86WT6 500 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 TICAM1Q8IUC6 712 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 ADGRG5Q8IZF4 528 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 KRT78Q8N1N4 520 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 RAB42Q8N4Z0 105 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 DENND6BQ8NEG7 585 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 OR7A2PQ8NGA2 310 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 IKZF5Q9H5V7 419 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 FGF22Q9HCT0 170 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 IMP3Q9NV31 184 aaKnown RBP20.47■□□□□ 0.87
ATG4D-201ENST00000309469 SIRT5Q9NXA8 310 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 MAGEL2Q9UJ55 1249 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 AURKCQ9UQB9 309 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 AP3M1Q9Y2T2 418 aa20.47■□□□□ 0.87
ATG4D-201ENST00000309469 F5P12259 2224 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 EIF4E1BA6NMX2 242 aaKnown RBP20.46■□□□□ 0.87
ATG4D-201ENST00000309469 TGFB1P01137 390 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 COX7A2P14406 83 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 CD72P21854 359 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 IL10P22301 178 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 TIA1P31483 386 aaKnown RBP eCLIP20.46■□□□□ 0.87
ATG4D-201ENST00000309469 KIAA1024LP59773 190 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 MRPS35P82673 323 aaKnown RBP20.46■□□□□ 0.87
ATG4D-201ENST00000309469 CLCA4Q14CN2 919 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 TBCELQ5QJ74 424 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 GALNT18Q6P9A2 607 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 ICA1LQ8NDH6 482 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 CDC26Q8NHZ8 85 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 STARD8Q92502 1023 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 MSANTD3Q96H12 275 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 CAMK1GQ96NX5 476 aa20.46■□□□□ 0.87
ATG4D-201ENST00000309469 REXO4Q9GZR2 422 aaKnown RBP20.46■□□□□ 0.87
ATG4D-201ENST00000309469 FPGTO14772 594 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 TIPRLO75663 272 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 B3GALT4O96024 378 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 HOXB9P17482 250 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 GABRG2P18507 467 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PTPN6P29350 595 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 HNRNPFP52597 415 aaKnown RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PHEXP78562 749 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 CYP51A1Q16850 503 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 TMEM132CQ8N3T6 1108 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 OR8J2Q8NGG1 315 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 OR10A6Q8NH74 314 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 FAM110BQ8TC76 370 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 GBP5Q96PP8 586 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PHF7Q9BWX1 381 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 SEMA6AQ9H2E6 1030 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 OR51B5Q9H339 312 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 RPF2Q9H7B2 306 aaKnown RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PELI2Q9HAT8 420 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 DOCK9Q9BZ29 2069 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 A0A1W2PPV9 198 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PRSS38A1L453 326 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 LRRC72A6NJI9 287 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 RFXANKO14593 260 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 HNRNPRO43390 633 aaKnown RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PCDH7O60245 1069 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 GSNP06396 782 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 UMPSP11172 480 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 WNT3P56703 355 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 CTBSQ01459 385 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 HMBOX1Q6NT76 420 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 ARMCX6Q7L4S7 300 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 LPCAT2Q7L5N7 544 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 DTWD1Q8N5C7 304 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 LINC01555Q8NAE3 123 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 OR2T12Q8NG77 320 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 NELL1Q92832 810 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 PPWD1Q96BP3 646 aaKnown RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 BIRC7Q96CA5 298 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 NR1H4Q96RI1 486 aaPredicted RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 CARS2Q9HA77 564 aaKnown RBP20.45■□□□□ 0.86
ATG4D-201ENST00000309469 WASH6PQ9NQA3 447 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 MAPRE3Q9UPY8 281 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 CA5BQ9Y2D0 317 aa20.45■□□□□ 0.86
ATG4D-201ENST00000309469 GNG14A0A1W2PPG7 69 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 PDZK1P1A8MUH7 402 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 SCAMP1O15126 338 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 SCAMP2O15127 329 aaKnown RBP20.44■□□□□ 0.86
ATG4D-201ENST00000309469 GGT1P19440 569 aa20.44■□□□□ 0.86
ATG4D-201ENST00000309469 OXTRP30559 389 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms